RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ELOA2Q8IYF1 753 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-210ENST00000444502 GIMAP8Q8ND71 665 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-210ENST00000444502 ACAD9Q9H845 621 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 HNRNPH1P31943 449 aaKnown RBP11.51□□□□□ -0.57
TOP3B-210ENST00000444502 TAF12Q16514 161 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 FAM237AA0A1B0GTK4 181 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 PVALEFA0A1B0GWK0 134 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 SKAP2O75563 359 aaPredicted RBP11.51□□□□□ -0.57
TOP3B-210ENST00000444502 FTCDO95954 541 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 TUBBP07437 444 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 PAX7P23759 505 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 KCNJ6P48051 423 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 C2orf54Q08AI8 447 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 TAF1CQ15572 869 aaPredicted RBP11.51□□□□□ -0.57
TOP3B-210ENST00000444502 ZBTB33Q86T24 672 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 MMS19Q96T76 1030 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 ADPGKQ9BRR6 497 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 ABCB6Q9NP58 842 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 MYO1AQ9UBC5 1043 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 PPP1R12AO14974 1030 aaPredicted RBP11.51□□□□□ -0.57
TOP3B-210ENST00000444502 ADAMTS3O15072 1205 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
TOP3B-210ENST00000444502 LRRC63Q05C16 580 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 SEPT7Q16181 437 aaKnown RBP11.51□□□□□ -0.57
TOP3B-210ENST00000444502 IL17AQ16552 155 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 APOBEC3HQ6NTF7 200 aaKnown RBP11.51□□□□□ -0.57
TOP3B-210ENST00000444502 MIS18BP1Q6P0N0 1132 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 CCDC155Q8N6L0 562 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 ATRIPQ8WXE1 791 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 TEX13BQ9BXU2 312 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 MED4Q9NPJ6 270 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 PCDHA13Q9Y5I0 950 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
TOP3B-210ENST00000444502 KCNK3O14649 394 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 PPFIA4O75335 1185 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 RPS6KA1Q15418 735 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 CEP85LQ5SZL2 805 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 SWSAP1Q6NVH7 229 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 ADAT2Q7Z6V5 191 aaKnown RBP11.5□□□□□ -0.57
TOP3B-210ENST00000444502 FAM76AQ8TAV0 307 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 CCDC114Q96M63 670 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 IWS1Q96ST2 819 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 PARVGQ9HBI0 331 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 ARFGEF2Q9Y6D5 1785 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 SPOPO43791 374 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
TOP3B-210ENST00000444502 SPOUT1Q5T280 376 aaKnown RBP11.5□□□□□ -0.57
TOP3B-210ENST00000444502 SLC30A10Q6XR72 485 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
TOP3B-210ENST00000444502 LMBR1Q8WVP7 490 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 CABS1Q96KC9 395 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 SPATS2LQ9NUQ6 558 aaKnown RBP11.5□□□□□ -0.57
TOP3B-210ENST00000444502 USTQ9Y2C2 406 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 HYOU1Q9Y4L1 999 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 FAM169AQ9Y6X4 670 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 PDS5AQ29RF7 1337 aaKnown RBP11.5□□□□□ -0.57
TOP3B-210ENST00000444502 ATP8B1O43520 1251 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 LRRN2O75325 713 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 EPHX2P34913 555 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 CAP2P40123 477 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 STAT1P42224 750 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 ERVK-24P63145 666 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 PSMD2Q13200 908 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 CFAP221Q4G0U5 840 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 NT5DC1Q5TFE4 455 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 C7orf25Q9BPX7 421 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 GABBR1Q9UBS5 961 aa11.5□□□□□ -0.57
TOP3B-210ENST00000444502 A0A0U1RQJ8 604 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 GOLGA6L7A0A1B0GV03 622 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 ADM5C9JUS6 153 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 TMEM191BP0C7N4 346 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 GUCY2FP51841 1108 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 SF3A3Q12874 501 aaKnown RBP eCLIP11.49□□□□□ -0.579e-7■■■■□ 23.9
TOP3B-210ENST00000444502 CEP55Q53EZ4 464 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 CDKAL1Q5VV42 579 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 PEX26Q7Z412 305 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 PROM2Q8N271 834 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 PROCA1Q8NCQ7 364 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-210ENST00000444502 MICAL1Q8TDZ2 1067 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 SGSM3Q96HU1 749 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 GLIS2Q9BZE0 524 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-210ENST00000444502 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 RNF40O75150 1001 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 TFRCP02786 760 aaKnown RBP11.49□□□□□ -0.57
TOP3B-210ENST00000444502 PSAPP07602 524 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 ELF1P32519 619 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 RHBDL3P58872 404 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 TNNC1P63316 161 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 SLC7A5Q01650 507 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 GFPT1Q06210 699 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-210ENST00000444502 CFAP58Q5T655 872 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 CCDC170Q8IYT3 715 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 NLRP7Q8WX94 980 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 NUCKS1Q9H1E3 243 aaKnown RBP11.49□□□□□ -0.57
TOP3B-210ENST00000444502 KBTBD4Q9NVX7 518 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 CTTNBP2NLQ9P2B4 639 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 CAPN11Q9UMQ6 739 aa11.49□□□□□ -0.57
TOP3B-210ENST00000444502 CCL15-CCL14A0A0B4J2E2 113 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms