RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 TRIM59Q8IWR1 403 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 RBM46Q8TBY0 533 aaKnown RBP18.07■□□□□ 0.48
PKP4-204ENST00000421462 CELF1Q92879 486 aaKnown RBP18.07■□□□□ 0.48
PKP4-204ENST00000421462 RNF25Q96BH1 459 aaPredicted RBP18.07■□□□□ 0.48
PKP4-204ENST00000421462 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 DNAJC17Q9NVM6 304 aaKnown RBP18.07■□□□□ 0.48
PKP4-204ENST00000421462 AJAP1Q9UKB5 411 aaPredicted RBP18.07■□□□□ 0.48
PKP4-204ENST00000421462 AMFRQ9UKV5 643 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 PNMA3Q9UL41 463 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 PPP1R9AQ9ULJ8 1098 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 TRPC6Q9Y210 931 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 TNS2Q63HR2 1409 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 CCDC188H7C350 402 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 FLOT1O75955 427 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 PAEPP09466 180 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 ERICH1Q86X53 443 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 SH3RF3Q8TEJ3 882 aaPredicted RBP18.07■□□□□ 0.48
PKP4-204ENST00000421462 KCNK9Q9NPC2 374 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 AIPL1Q9NZN9 384 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 BCS1LQ9Y276 419 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 GHRP10912 638 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 EXOC3L4Q17RC7 722 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 GPBP1Q86WP2 473 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 SYN2Q92777 582 aaPredicted RBP18.06■□□□□ 0.48
PKP4-204ENST00000421462 RAB34Q9BZG1 259 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 GANQ9H2C0 597 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 CETN3O15182 167 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 CLIC2O15247 247 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 SARNPP82979 210 aaKnown RBP18.06■□□□□ 0.48
PKP4-204ENST00000421462 SEMA3FQ13275 785 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 GALNT17Q6IS24 598 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 GLYCTKQ8IVS8 523 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 DAGLBQ8NCG7 672 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 SLC17A8Q8NDX2 589 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 MAGEC3Q8TD91 643 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 ZBTB10Q96DT7 871 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 HOOK2Q96ED9 719 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 ZNF570Q96NI8 536 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 KCNG1Q9UIX4 513 aa18.06■□□□□ 0.48
PKP4-204ENST00000421462 CASZ1Q86V15 1759 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 CREB1P16220 341 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 GALCP54803 685 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 NUGGCQ68CJ6 796 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 CAPRIN2Q6IMN6 1127 aaKnown RBP18.05■□□□□ 0.48
PKP4-204ENST00000421462 ATXN2LQ8WWM7 1075 aaKnown RBP18.05■□□□□ 0.48
PKP4-204ENST00000421462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.05■□□□□ 0.482e-7■■■■■ 64.2
PKP4-204ENST00000421462 TLCD1Q96CP7 247 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 NOP53Q9NZM5 478 aaKnown RBP18.05■□□□□ 0.48
PKP4-204ENST00000421462 MINPP1Q9UNW1 487 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 PCDHB13Q9Y5F0 798 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 TAF1P21675 1872 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 POTEB3A0JP26 581 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 POTECB2RU33 542 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 TCP11X1B4DZS4 312 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 PLCG2P16885 1265 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 CASP5P51878 434 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 POTEBQ6S5H4 581 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 NT5DC3Q86UY8 548 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 ATP8B4Q8TF62 1192 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 DNAJC19Q96DA6 116 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 C18orf8Q96DM3 657 aa18.05■□□□□ 0.48
PKP4-204ENST00000421462 CALR3Q96L12 384 aaKnown RBP18.05■□□□□ 0.48
PKP4-204ENST00000421462 PALM3A6NDB9 673 aaPredicted RBP18.04■□□□□ 0.48
PKP4-204ENST00000421462 MEIS1O00470 390 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 EVI5O60447 810 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 KRT16P08779 473 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 NQO1P15559 274 aaKnown RBP18.04■□□□□ 0.48
PKP4-204ENST00000421462 ERFEQ4G0M1 354 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 C12orf60Q5U649 245 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 TXNRD3Q86VQ6 643 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 PROM2Q8N271 834 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 SCFD1Q8WVM8 642 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 ADAM7Q9H2U9 754 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 SLITRK6Q9H5Y7 841 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 GPCPD1Q9NPB8 672 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.481e-6■■■■■ 89
PKP4-204ENST00000421462 ARMCX3Q9UH62 379 aaPredicted RBP18.04■□□□□ 0.48
PKP4-204ENST00000421462 SRCAPQ6ZRS2 3230 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 COL18A1P39060 1754 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 ZNF804BA4D1E1 1349 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
PKP4-204ENST00000421462 ZCWPW2Q504Y3 356 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 ACSBG1Q96GR2 724 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 RAB17Q9H0T7 212 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 IKZF4Q9H2S9 585 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 BCAS3Q9H6U6 928 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 SLC12A4Q9UP95 1085 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 ABCB11O95342 1321 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 CCDC169A6NNP5 214 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 USP17L5A8MUK1 530 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 LONRF1Q17RB8 773 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 SLC51AQ86UW1 340 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 CLEC10AQ8IUN9 316 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 ARMC2Q8NEN0 867 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 SLC35G2Q8TBE7 412 aa18.04■□□□□ 0.48
PKP4-204ENST00000421462 P3H4Q92791 437 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms