RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CWH43Q9H720 699 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 RGS18Q9NS28 235 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 C1orf112Q9NSG2 853 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 SLC9A2Q9UBY0 812 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 SORCS3Q9UPU3 1222 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 HIDE1A8MVS5 230 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 C2CD4DB7Z1M9 353 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 FGFR1P11362 822 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 LAG3P18627 525 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 SART3Q15020 963 aaKnown RBP19.1■□□□□ 0.65
CHMP3-203ENST00000409225 SLC24A5Q71RS6 500 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 FRMD5Q7Z6J6 570 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 RALYLQ86SE5 291 aaKnown RBP19.1■□□□□ 0.65
CHMP3-203ENST00000409225 NME8Q8N427 588 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 RASGRP4Q8TDF6 673 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 MYL10Q9BUA6 226 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 PSTPIP2Q9H939 334 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 CDHR5Q9HBB8 845 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 JADE2Q9NQC1 790 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
CHMP3-203ENST00000409225 PUF60Q9UHX1 559 aaKnown RBP19.1■□□□□ 0.65
CHMP3-203ENST00000409225 LZTS1Q9Y250 596 aa19.1■□□□□ 0.65
CHMP3-203ENST00000409225 RIF1Q5UIP0 2472 aaKnown RBP19.1■□□□□ 0.65
CHMP3-203ENST00000409225 C9IYK1 514 aa19.09■□□□□ 0.65
CHMP3-203ENST00000409225 HOXB8P17481 243 aaPredicted RBP19.09■□□□□ 0.65
CHMP3-203ENST00000409225 CHD1LQ86WJ1 897 aa19.09■□□□□ 0.65
CHMP3-203ENST00000409225 TMEM40Q8WWA1 233 aa19.09■□□□□ 0.65
CHMP3-203ENST00000409225 POMKQ9H5K3 350 aa19.09■□□□□ 0.65
CHMP3-203ENST00000409225 ATP6V0A4Q9HBG4 840 aa19.09■□□□□ 0.65
CHMP3-203ENST00000409225 ST3GAL5Q9UNP4 418 aa19.09■□□□□ 0.65
CHMP3-203ENST00000409225 FAM186AA6NE01 2351 aa19.08■□□□□ 0.65
CHMP3-203ENST00000409225 MAFGO15525 162 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 CYP21A2P08686 494 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 PDE4AP27815 886 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 ID4P47928 161 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 STAT5BP51692 787 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 ACTR2P61160 394 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 PLCB3Q01970 1234 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 ASTLQ6HA08 431 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-203ENST00000409225 PLPPR4Q7Z2D5 763 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 ERMP1Q7Z2K6 904 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 CTCFLQ8NI51 663 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-203ENST00000409225 NKD2Q969F2 451 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-203ENST00000409225 PPP1R16BQ96T49 567 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 NGRNQ9NPE2 291 aaKnown RBP19.08■□□□□ 0.64
CHMP3-203ENST00000409225 TAF6LQ9Y6J9 622 aa19.08■□□□□ 0.64
CHMP3-203ENST00000409225 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-203ENST00000409225 SPDYE3A6NKU9 549 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 ASGR2P07307 311 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 KLRC1P26715 233 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 PBX3P40426 434 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 CES5AQ6NT32 575 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 TMC7Q7Z402 723 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 SMC5Q8IY18 1101 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 ADSSL1Q8N142 457 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 NCOA7Q8NI08 942 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 CASP10Q92851 521 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 SDF4Q9BRK5 362 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 MFSD1Q9H3U5 465 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 KCNH7Q9NS40 1196 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 TMEM161AQ9NX61 479 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 PCDHA6Q9UN73 950 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 PCDHA8Q9Y5H6 950 aa19.07■□□□□ 0.64
CHMP3-203ENST00000409225 MYO10Q9HD67 2058 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 E7EWF7 191 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 GPR182O15218 404 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 PLEKHA8P1O95397 391 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 WEE2P0C1S8 567 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 KIF5BP33176 963 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 ANTXR2P58335 489 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 ODR4Q5SWX8 454 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 KIAA0319LQ8IZA0 1049 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 ZNF654Q8IZM8 581 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 NECTIN4Q96NY8 510 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 ADAM7Q9H2U9 754 aa19.06■□□□□ 0.64
CHMP3-203ENST00000409225 hCG_1642624A0A1W2PR95 340 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 CA8P35219 290 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 KRT17Q04695 432 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 ITIH3Q06033 890 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 KCNT2Q6UVM3 1135 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 LRRC55Q6ZSA7 311 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 FAM228AQ86W67 206 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 CMTR1Q8N1G2 835 aaKnown RBP19.05■□□□□ 0.64
CHMP3-203ENST00000409225 SRBD1Q8N5C6 995 aaKnown RBP19.05■□□□□ 0.64
CHMP3-203ENST00000409225 CYP2W1Q8TAV3 490 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 IGDCC4Q8TDY8 1250 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 ZNF558Q96NG5 402 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 MAP3K14Q99558 947 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 OSMRQ99650 979 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 MXRA8Q9BRK3 442 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 TMEM117Q9H0C3 514 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 HCFC2Q9Y5Z7 792 aa19.05■□□□□ 0.64
CHMP3-203ENST00000409225 NFASCO94856 1347 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 DDAH1O94760 285 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 SMARCA1P28370 1054 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 FAM189BP81408 668 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 NUCB1Q02818 461 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 PTH1RQ03431 593 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 KIZQ2M2Z5 673 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms