RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 CCDC125Q86Z20 511 aa16.69■□□□□ 0.26
SPOCK1-202ENST00000394945 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
SPOCK1-202ENST00000394945 PRPF38AQ8NAV1 312 aaKnown RBP16.69■□□□□ 0.26
SPOCK1-202ENST00000394945 ARL8AQ96BM9 186 aa16.69■□□□□ 0.26
SPOCK1-202ENST00000394945 UPF3AQ9H1J1 476 aaKnown RBP16.69■□□□□ 0.26
SPOCK1-202ENST00000394945 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
SPOCK1-202ENST00000394945 MCF2LO15068 1137 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 PLA2G4BP0C869 781 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 ECE1P42892 770 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 RINT1Q6NUQ1 792 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 SESTD1Q86VW0 696 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 LRRN4CLQ8ND94 238 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 PRPF31Q8WWY3 499 aaKnown RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 NOP56O00567 594 aaKnown RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 KRT10P13645 584 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 FGFR4P22455 802 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 TRMT10CQ7L0Y3 403 aaKnown RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 PROM2Q8N271 834 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 GFM2Q969S9 779 aaKnown RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 ERP27Q96DN0 273 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 SH2D4AQ9H788 454 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 PREX2Q70Z35 1606 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 TMEM259Q4ZIN3 620 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 ARHGEF10LQ9HCE6 1279 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 AGPAT5Q9NUQ2 364 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 TTI1O43156 1089 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 SKAP2O75563 359 aaPredicted RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 SASH3O75995 380 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 SERPINB3P29508 390 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 LIG4P49917 911 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 FOXR1Q6PIV2 292 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 CCDC137Q6PK04 289 aaKnown RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 NSMFQ6X4W1 530 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 RSRC2Q7L4I2 434 aaKnown RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 PROCA1Q8NCQ7 364 aaPredicted RBP16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 DNAJC12Q9UKB3 198 aa16.68■□□□□ 0.26
SPOCK1-202ENST00000394945 IL1RL1Q01638 556 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 KCNH2Q12809 1159 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 TMC4Q7Z404 712 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 TRIM50Q86XT4 487 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 KCNG1Q9UIX4 513 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 PCDHA1Q9Y5I3 950 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 PRPF6O94906 941 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 DHX34Q14147 1143 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 TBC1D10CQ8IV04 446 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 HDAC11Q96DB2 347 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 WARS2Q9UGM6 360 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 HNRNPCL1O60812 293 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 SCTRP47872 440 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 MXI1P50539 228 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 CYB5R4Q7L1T6 521 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 POMGNT1Q8WZA1 660 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 HEMGNQ9BXL5 484 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 EDEM3Q9BZQ6 932 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 MEIS1O00470 390 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 XKR9Q5GH70 373 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 CPXCR1Q8N123 301 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 CCDC124Q96CT7 223 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 EHD2Q9NZN4 543 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 FBXO2Q9UK22 296 aaPredicted RBP16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
SPOCK1-202ENST00000394945 SNUPNO95149 360 aaKnown RBP16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 OLFML2BQ68BL8 750 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 PDXDC1Q6P996 788 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 TTC25Q96NG3 672 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 PCIF1Q9H4Z3 704 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 PCDHB4Q9Y5E5 795 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 ZRANB2O95218 330 aaKnown RBP eCLIP16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 PAX7P23759 505 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 STAT2P52630 851 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 SUPT20HQ8NEM7 779 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 RAD51CO43502 376 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 CDC37Q16543 378 aaPredicted RBP16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 TRIM59Q8IWR1 403 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 CYP4F11Q9HBI6 524 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 KITP10721 976 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 CDAN1Q8IWY9 1227 aa16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 STRBPQ96SI9 672 aaKnown RBP16.66■□□□□ 0.26
SPOCK1-202ENST00000394945 PVALEFA0A1B0GWK0 134 aa16.65■□□□□ 0.26
SPOCK1-202ENST00000394945 GNGT2O14610 69 aa16.65■□□□□ 0.26
SPOCK1-202ENST00000394945 ARL4CP56559 192 aa16.65■□□□□ 0.26
SPOCK1-202ENST00000394945 GPC5P78333 572 aa16.65■□□□□ 0.26
SPOCK1-202ENST00000394945 LRRC36Q1X8D7 754 aa16.65■□□□□ 0.26
SPOCK1-202ENST00000394945 KIAA1755Q5JYT7 1200 aa16.65■□□□□ 0.26
SPOCK1-202ENST00000394945 RBM43Q6ZSC3 357 aaKnown RBP16.65■□□□□ 0.26
SPOCK1-202ENST00000394945 DDX42Q86XP3 938 aaKnown RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms