RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 TESPA1A2RU30 521 aaPredicted RBP20.36■□□□□ 0.85
STRADB-202ENST00000392249 AFPP02771 609 aaKnown RBP20.36■□□□□ 0.85
STRADB-202ENST00000392249 GUCY2CP25092 1073 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 HIRAP54198 1017 aaPredicted RBP20.36■□□□□ 0.85
STRADB-202ENST00000392249 CHMP4BP1P59074 171 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 KIF5AQ12840 1032 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 PRKG1Q13976 671 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 BAATQ14032 418 aaPredicted RBP20.36■□□□□ 0.85
STRADB-202ENST00000392249 TDRD12Q587J7 1177 aaKnown RBP20.36■□□□□ 0.85
STRADB-202ENST00000392249 TCERG1LQ5VWI1 586 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 HGSNATQ68CP4 663 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 PADI6Q6TGC4 694 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 ARHGAP27Q6ZUM4 889 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 GOLGA1Q92805 767 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 PCDHB13Q9Y5F0 798 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 SSC5DA1L4H1 1573 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 SPDYE4A6NLX3 237 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 SLC16A3O15427 465 aaKnown RBP20.35■□□□□ 0.85
STRADB-202ENST00000392249 ATP9AO75110 1047 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 MAPK7Q13164 816 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 TUBB2AQ13885 445 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 COG2Q14746 738 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 SFMBT2Q5VUG0 894 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 DAW1Q8N136 415 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 EHBP1Q8NDI1 1231 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 REPS2Q8NFH8 660 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 TUBB2BQ9BVA1 445 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 TBC1D22BQ9NU19 505 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 PCDHA13Q9Y5I0 950 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 POLR2AP24928 1970 aaKnown RBP20.35■□□□□ 0.85
STRADB-202ENST00000392249 TLR2O60603 784 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 AMPD2Q01433 879 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 CEP112Q8N8E3 955 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 C12orf42Q96LP6 360 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 NUCKS1Q9H1E3 243 aaKnown RBP20.35■□□□□ 0.85
STRADB-202ENST00000392249 GANQ9H2C0 597 aa20.35■□□□□ 0.85
STRADB-202ENST00000392249 METTL14Q9HCE5 456 aaKnown RBP20.35■□□□□ 0.85
STRADB-202ENST00000392249 LCA5LO95447 670 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 ACTN1P12814 892 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 DSG3P32926 999 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 QARSP47897 775 aaKnown RBP20.34■□□□□ 0.85
STRADB-202ENST00000392249 CLCN6P51797 869 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 RAPGEF1Q13905 1077 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 TRMT1LQ7Z2T5 733 aaKnown RBP20.34■□□□□ 0.85
STRADB-202ENST00000392249 GPC2Q8N158 579 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 SH2D3AQ9BRG2 576 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 TSGA10Q9BZW7 698 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 HDAC6Q9UBN7 1215 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 MYO6Q9UM54 1294 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 ATP1A1P05023 1023 aaKnown RBP20.34■□□□□ 0.85
STRADB-202ENST00000392249 SLC9A1P19634 815 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 GFPT1Q06210 699 aaPredicted RBP20.34■□□□□ 0.85
STRADB-202ENST00000392249 SLC9C1Q4G0N8 1177 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 STXBP4Q6ZWJ1 553 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 SLC35C1Q96A29 364 aa20.34■□□□□ 0.85
STRADB-202ENST00000392249 ZNF214Q9UL59 606 aaPredicted RBP20.34■□□□□ 0.85
STRADB-202ENST00000392249 TMEM150BA6NC51 233 aa20.33■□□□□ 0.85
STRADB-202ENST00000392249 C19orf81C9J6K1 198 aa20.33■□□□□ 0.85
STRADB-202ENST00000392249 UBE4BO95155 1302 aa20.33■□□□□ 0.85
STRADB-202ENST00000392249 RARRES1P49788 294 aa20.33■□□□□ 0.85
STRADB-202ENST00000392249 ARID5AQ03989 594 aa20.33■□□□□ 0.85
STRADB-202ENST00000392249 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
STRADB-202ENST00000392249 PLS1Q14651 629 aa20.33■□□□□ 0.85
STRADB-202ENST00000392249 UGCGQ16739 394 aa20.33■□□□□ 0.85
STRADB-202ENST00000392249 ASTE1Q2TB18 679 aaPredicted RBP20.33■□□□□ 0.85
STRADB-202ENST00000392249 SYN2Q92777 582 aaPredicted RBP20.33■□□□□ 0.85
STRADB-202ENST00000392249 SECISBP2LQ93073 1101 aaKnown RBP20.33■□□□□ 0.85
STRADB-202ENST00000392249 SSU72P8A0A1W2PR75 194 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 USO1O60763 962 aaKnown RBP20.32■□□□□ 0.84
STRADB-202ENST00000392249 TMEM132BQ14DG7 1078 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 EXOC3L4Q17RC7 722 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 WHAMMP3Q1A5X7 153 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 HS2ST1Q7LGA3 356 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 FAM186BQ8IYM0 893 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 GPR161Q8N6U8 529 aaKnown RBP20.32■□□□□ 0.84
STRADB-202ENST00000392249 RABGGTAQ92696 567 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 ZNF446Q9NWS9 450 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 TCEAL9Q9UHQ7 104 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 SRCAPQ6ZRS2 3230 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 CCNE2O96020 404 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 SERPING1P05155 500 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 ZSCAN20P17040 1043 aaPredicted RBP20.32■□□□□ 0.84
STRADB-202ENST00000392249 LMNB1P20700 586 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 YWHABP31946 246 aaKnown RBP20.32■□□□□ 0.84
STRADB-202ENST00000392249 TRAPPC11Q7Z392 1133 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 FAM133AQ8N9E0 248 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
STRADB-202ENST00000392249 GBP3Q9H0R5 595 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 AGPAT3Q9NRZ7 376 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 TMOD4Q9NZQ9 345 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 DBR1Q9UK59 544 aaKnown RBP20.32■□□□□ 0.84
STRADB-202ENST00000392249 ADAMTS5Q9UNA0 930 aa20.32■□□□□ 0.84
STRADB-202ENST00000392249 DICER1Q9UPY3 1922 aaKnown RBP20.31■□□□□ 0.84
STRADB-202ENST00000392249 K7ENM7 598 aa20.31■□□□□ 0.84
STRADB-202ENST00000392249 NR3C2P08235 984 aa20.31■□□□□ 0.84
STRADB-202ENST00000392249 PON1P27169 355 aa20.31■□□□□ 0.84
STRADB-202ENST00000392249 PSMC2P35998 433 aaKnown RBP20.31■□□□□ 0.84
STRADB-202ENST00000392249 CYP2J2P51589 502 aa20.31■□□□□ 0.84
STRADB-202ENST00000392249 ENOX2Q16206 610 aaKnown RBP20.31■□□□□ 0.84
STRADB-202ENST00000392249 UTP14CQ5TAP6 766 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms