RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.22■□□□□ 0.67
TRAF3IP1-201ENST00000373327 CD19P15391 556 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 MTMR8Q96EF0 704 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 MMTAG2Q9BU76 263 aaKnown RBP19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 COL1A1P02452 1464 aaPredicted RBP19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 IFNB1P01574 187 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 FERP16591 822 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 INPP5BP32019 993 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 AGBL1Q96MI9 1066 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 ERGIC2Q96RQ1 377 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 PLVAPQ9BX97 442 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 ANO9A1A5B4 782 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 PSMD14O00487 310 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 KRT19P08727 400 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 CYP2C19P33261 490 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 ECM1Q16610 540 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 MTERF2Q49AM1 385 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 CCDC121Q6ZUS5 278 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 CEP57Q86XR8 500 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 SUPT20HQ8NEM7 779 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 SNX24Q9Y343 169 aa19.21■□□□□ 0.67
TRAF3IP1-201ENST00000373327 ZNF653Q96CK0 615 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PDE2AO00408 941 aaPredicted RBP19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 MSH4O15457 936 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 MXI1P50539 228 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ARFGAP2Q8N6H7 521 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 SCFD1Q8WVM8 642 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 CEP63Q96MT8 703 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 REXO2Q9Y3B8 237 aaKnown RBP19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 NKRFO15226 690 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 NF2P35240 595 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 USP11P51784 963 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 OSTNP61366 133 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 TRAPPC11Q7Z392 1133 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 GPATCH11Q8N954 259 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 CASP5P51878 434 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 SPP2Q13103 211 aa19.2■□□□□ 0.66
TRAF3IP1-201ENST00000373327 IL1R1P14778 569 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 STRN3Q13033 797 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 COG2Q14746 738 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 SEPT14Q6ZU15 432 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 WDR11Q9BZH6 1224 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 L1RE1Q9UN81 338 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 FANCGO15287 622 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 LIG4P49917 911 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ZNF394Q53GI3 561 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 KIFC3Q9BVG8 833 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 TMEM150BA6NC51 233 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ATMINO43313 823 aaPredicted RBP19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 HIP1RO75146 1068 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 UAP1Q16222 522 aaPredicted RBP19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 CCNI2Q6ZMN8 369 aaPredicted RBP19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PASD1Q8IV76 773 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PLCD3Q8N3E9 789 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 CABS1Q96KC9 395 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 RMDN3Q96TC7 470 aa19.19■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ZBTB7AO95365 584 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PRELPP51888 382 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 SLC18A3Q16572 532 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 CEP55Q53EZ4 464 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 CYFIP1Q7L576 1253 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 GLG1Q92896 1179 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 FAM20AQ96MK3 541 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PLCD4Q9BRC7 762 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 NOVA2Q9UNW9 492 aaKnown RBP19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PLAAQ9Y263 795 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 GAP43P17677 238 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 DMP1Q13316 513 aaPredicted RBP19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 EPC2Q52LR7 807 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 APOBEC3HQ6NTF7 200 aaKnown RBP19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 KIFAP3Q92845 792 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 CELF4Q9BZC1 486 aaKnown RBP19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 FAM86B1E9PN63 330 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 FAM86B2P0C5J1 330 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ATF7P17544 494 aaPredicted RBP19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 TMOD1P28289 359 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 NPEPPSP55786 919 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PLA2G4FQ68DD2 849 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 TTLL6Q8N841 843 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ZNF408Q9H9D4 720 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 KMT5AQ9NQR1 393 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 PRDM4Q9UKN5 801 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 EMSYQ7Z589 1322 aa19.18■□□□□ 0.66
TRAF3IP1-201ENST00000373327 LRRC10BA6NIK2 292 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 DAPK3O43293 454 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 KIF4AO95239 1232 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 IRX5P78411 483 aaPredicted RBP19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 MTMR1Q13613 665 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ANKRD35Q8N283 1001 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 BZW2Q9Y6E2 419 aaKnown RBP19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ESYT2A0FGR8 921 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 IFT88Q13099 833 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 ZNF365Q70YC5 407 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 HAS1Q92839 578 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 AKAP3O75969 853 aa19.17■□□□□ 0.66
TRAF3IP1-201ENST00000373327 DENND2CQ68D51 928 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms