RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 KCNK18Q7Z418 384 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 IRF2BP2Q7Z5L9 587 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 SAAL1Q96ER3 474 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 STK38LQ9Y2H1 464 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 RREB1Q92766 1687 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 KCNH2Q12809 1159 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 SPDYCQ5MJ68 293 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 VPS36Q86VN1 386 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 REXO1Q8N1G1 1221 aaKnown RBP18.36■□□□□ 0.53
DKC1-201ENST00000369550 ATP8B4Q8TF62 1192 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 DYDC1Q8WWB3 177 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 PRCCQ92733 491 aaPredicted RBP18.36■□□□□ 0.53
DKC1-201ENST00000369550 NUDT12Q9BQG2 462 aa18.36■□□□□ 0.53
DKC1-201ENST00000369550 MYH4Q9Y623 1939 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 IGF2BP3O00425 579 aaKnown RBP eCLIP18.35■□□□□ 0.53
DKC1-201ENST00000369550 NUDT17P0C025 328 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 H2AFZP0C0S5 128 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 ADAM9Q13443 819 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 C11orf91Q3C1V1 193 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 H2AFVQ71UI9 128 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 UHMK1Q8TAS1 419 aaKnown RBP18.35■□□□□ 0.53
DKC1-201ENST00000369550 KLHL29Q96CT2 875 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 DYNLL2Q96FJ2 89 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 ADAM7Q9H2U9 754 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 VAT1LQ9HCJ6 419 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 BMP2KQ9NSY1 1161 aaPredicted RBP18.35■□□□□ 0.53
DKC1-201ENST00000369550 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
DKC1-201ENST00000369550 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 ZBTB48P10074 688 aaPredicted RBP18.35■□□□□ 0.53
DKC1-201ENST00000369550 CCND1P24385 295 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 COPB2P35606 906 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 SLCO1A2P46721 670 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 FOXR2Q6PJQ5 311 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 MARCH10Q8NA82 808 aaPredicted RBP18.35■□□□□ 0.53
DKC1-201ENST00000369550 TXLNGYQ9BZA5 131 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 NR2E1Q9Y466 385 aa18.35■□□□□ 0.53
DKC1-201ENST00000369550 CACNA1SQ13698 1873 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 UCHL3P15374 230 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 SLC9A1P19634 815 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 FXR2P51116 673 aaKnown RBP eCLIP18.34■□□□□ 0.533e-7■■■□□ 17.9
DKC1-201ENST00000369550 PDE6CP51160 858 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 NCALDP61601 193 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 SLC29A2Q14542 456 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 SBK1Q52WX2 424 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 NT5DC3Q86UY8 548 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 KIF2BQ8N4N8 673 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 FGFBP2Q9BYJ0 223 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 TMEM260Q9NX78 707 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 AMFRQ9UKV5 643 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 RARAP10276 462 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 HOXA7P31268 230 aaPredicted RBP18.34■□□□□ 0.53
DKC1-201ENST00000369550 MAP2K1Q02750 393 aaPredicted RBP18.34■□□□□ 0.53
DKC1-201ENST00000369550 INTS5Q6P9B9 1019 aaKnown RBP18.34■□□□□ 0.53
DKC1-201ENST00000369550 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 GLG1Q92896 1179 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 MTMR9Q96QG7 549 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 ERP44Q9BS26 406 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 EPB41L4BQ9H329 900 aa18.34■□□□□ 0.53
DKC1-201ENST00000369550 ENO4A6NNW6 628 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 SLC37A4O43826 429 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 ALADP13716 330 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 C6orf118Q5T5N4 469 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 RNF25Q96BH1 459 aaPredicted RBP18.33■□□□□ 0.52
DKC1-201ENST00000369550 ACSBG1Q96GR2 724 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.33■□□□□ 0.52
DKC1-201ENST00000369550 SNX24Q9Y343 169 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 SLIT2O94813 1529 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 PALM3A6NDB9 673 aaPredicted RBP18.33■□□□□ 0.52
DKC1-201ENST00000369550 AGTP01019 485 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 PTENP60484 403 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 POU5F1Q01860 360 aaKnown RBP18.33■□□□□ 0.52
DKC1-201ENST00000369550 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
DKC1-201ENST00000369550 SLFN11Q7Z7L1 901 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 HES6Q96HZ4 224 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 KCNMB3Q9NPA1 279 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 STXBP5LQ9Y2K9 1186 aa18.33■□□□□ 0.52
DKC1-201ENST00000369550 A8MUI8 341 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 SNX3O60493 162 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 SMNDC1O75940 238 aaKnown RBP eCLIP18.32■□□□□ 0.525e-7■■■□□ 15.2
DKC1-201ENST00000369550 TDP2O95551 362 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 ZNF131P52739 623 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 ADCY2Q08462 1091 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 HERC4Q5GLZ8 1057 aaPredicted RBP18.32■□□□□ 0.52
DKC1-201ENST00000369550 MIS18BP1Q6P0N0 1132 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 ERICH1Q86X53 443 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 FBXO25Q8TCJ0 367 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 U2AF1L4Q8WU68 220 aaKnown RBP18.32■□□□□ 0.52
DKC1-201ENST00000369550 DNAJC19Q96DA6 116 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 TMEM47Q9BQJ4 181 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 STMN4Q9H169 189 aaPredicted RBP18.32■□□□□ 0.52
DKC1-201ENST00000369550 ZHX3Q9H4I2 956 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 ZDHHC18Q9NUE0 388 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 SLC5A4Q9NY91 659 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 HDAC9Q9UKV0 1011 aa18.32■□□□□ 0.52
DKC1-201ENST00000369550 USP15Q9Y4E8 981 aaPredicted RBP18.32■□□□□ 0.52
DKC1-201ENST00000369550 LOC102724428A0A0B4J2F2 783 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms