RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 POU3F3P20264 500 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 RAB27AP51159 221 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 LACTBP83111 547 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 HNRNPUQ00839 825 aaKnown RBP eCLIP4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 TCF15Q12870 199 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 AP3B2Q13367 1082 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 TAF1CQ15572 869 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 MZT2AQ6P582 158 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 PI4K2BQ8TCG2 481 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 RAET1EQ8TD07 263 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 CCDC34Q96HJ3 373 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 WNK4Q96J92 1243 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 TMEM39AQ9NV64 488 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 SMC3Q9UQE7 1217 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 MSRB2Q9Y3D2 182 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 PFASO15067 1338 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 CDHR2Q9BYE9 1310 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 PTPN13Q12923 2485 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 FAM229AH3BQW9 127 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 AKAP10O43572 662 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 DEAF1O75398 565 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 KRT38O76015 456 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 CTSHP09668 335 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 SOX5P35711 763 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 NEK2P51955 445 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 SMAD3P84022 425 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 GSTM4Q03013 218 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 FAAP100Q0VG06 881 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 TBX2Q13207 712 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 BIRC3Q13489 604 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 SQSTM1Q13501 440 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 MLC1Q15049 377 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 LRRC26Q2I0M4 334 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 ZNF423Q2M1K9 1284 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 HP1BP3Q5SSJ5 553 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 FAM102BQ5T8I3 360 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 JAKMIP3Q5VZ66 844 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 MZT2BQ6NZ67 158 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 TPTE2Q6XPS3 522 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 DGLUCYQ7Z3D6 616 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 DAAM2Q86T65 1068 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 MORC1Q86VD1 984 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 C11orf74Q86VG3 221 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 SKAP1Q86WV1 359 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 RMDN1Q96DB5 314 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 TMEM87BQ96K49 555 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 CDH19Q9H159 772 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 CAAP1Q9H8G2 361 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 TPSG1Q9NRR2 321 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 TTLL3Q9Y4R7 772 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 ZNF831Q5JPB2 1677 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 GOLGA6L22H0YM25 854 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 NCAM1P13591 858 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 CD68P34810 354 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 ETFBP38117 255 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 STAT3P40763 770 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 ZNF132P52740 706 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 NFKB2Q00653 900 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 PRKCZQ05513 592 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 TNIP1Q15025 636 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 ARMC3Q5W041 872 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 STRBPQ96SI9 672 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 EMILIN2Q9BXX0 1053 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 CD248Q9HCU0 757 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 SH3GLB2Q9NR46 395 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 SRRDQ9UH36 339 aa4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 ANGEL1Q9UNK9 670 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-205ENST00000368295 COL3A1P02461 1466 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 ANO9A1A5B4 782 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 CAMTA2O94983 1202 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 RLBP1P12271 317 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 NME2P22392 152 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 OAS2P29728 719 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 HOXC13P31276 330 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 CCT5P48643 541 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 ZBED6P86452 979 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 PIN1Q13526 163 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 C2orf27AQ580R0 203 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 CT47A1Q5JQC4 288 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 AKNAD1Q5T1N1 836 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 MEI1Q5TIA1 1274 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 HGSNATQ68CP4 663 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 C16orf54Q6UWD8 224 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 OR8H2Q8N162 312 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 CLASRPQ8N2M8 674 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 FAM43AQ8N2R8 423 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 MAGEB6Q8N7X4 407 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 MIGA1Q8NAN2 632 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 GALNT11Q8NCW6 608 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 JARID2Q92833 1246 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 KLHDC7BQ96G42 594 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 TBATAQ96M53 351 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 MAP3K14Q99558 947 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 PAIP2Q9BPZ3 127 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 ELAC2Q9BQ52 826 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 NOC4LQ9BVI4 516 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 MRPL18Q9H0U6 180 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 RANBP17Q9H2T7 1088 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 C11orf49Q9H6J7 331 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 RBM28Q9NW13 759 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms