RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SIGLEC1Q9BZZ2 1709 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 DAPK3O43293 454 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 USP11P51784 963 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 ZNF543Q08ER8 600 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 DRAP1Q14919 205 aaPredicted RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 SCYL2Q6P3W7 929 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 CCDC110Q8TBZ0 833 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 STK10O94804 968 aaKnown RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 P4HA1P13674 534 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 POLR2BP30876 1174 aaKnown RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 ZNF211Q13398 564 aaPredicted RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 ARMC9Q7Z3E5 817 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 ADGRA1Q86SQ6 560 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 MASTLQ96GX5 879 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 RASSF2P50749 326 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 KRT81Q14533 505 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 TSNAXIP1Q2TAA8 658 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 C16orf86Q6ZW13 317 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.62□□□□□ -0.399e-9■■□□□ 13.8
COPA-202ENST00000368069 TRIM6Q9C030 488 aaPredicted RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 DNAJC17Q9NVM6 304 aaKnown RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 SMARCAL1Q9NZC9 954 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 RICTORQ6R327 1708 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 RWDD2BP57060 319 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 LMNB2Q03252 620 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 LRRC8CQ8TDW0 803 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 TBK1Q9UHD2 729 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
COPA-202ENST00000368069 NOC2LQ9Y3T9 749 aaKnown RBP12.62□□□□□ -0.39
COPA-202ENST00000368069 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 ADRA2BP18089 450 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 IL9RQ01113 521 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 TADA2BQ86TJ2 420 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 GLYCTKQ8IVS8 523 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 SLC7A3Q8WY07 619 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 TBC1D31Q96DN5 1066 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 VIPAS39Q9H9C1 493 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 NRBP2Q9NSY0 501 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 DIS3Q9Y2L1 958 aaKnown RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 SSU72P8A0A1W2PR75 194 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 SGK1O00141 431 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 PPP2R5AQ15172 486 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 TMED2Q15363 201 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 BRDTQ58F21 947 aaPredicted RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 BSPRYQ5W0U4 402 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 CCNI2Q6ZMN8 369 aaPredicted RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 TCP11Q8WWU5 503 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 RIN2Q8WYP3 895 aaPredicted RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 RAB3IPQ96QF0 476 aaPredicted RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 PSMD1Q99460 953 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 EIF2AK1Q9BQI3 630 aaKnown RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 INTS2Q9H0H0 1204 aaKnown RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 MIF4GDA9UHW6 222 aaKnown RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 PDHBP11177 359 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 ZNF18P17022 549 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 SLC8A1P32418 973 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 SLC18A3Q16572 532 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 MTERF2Q49AM1 385 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 FRMD5Q7Z6J6 570 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 RPUSD2Q8IZ73 545 aaKnown RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 ARHGAP24Q8N264 748 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 XXYLT1Q8NBI6 393 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 PNKPQ96T60 521 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 ABCB11O95342 1321 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 CCDC160A6NGH7 325 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 ACSL3O95573 720 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 KRT1P04264 644 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 PKN1Q16512 942 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 PODNQ7Z5L7 613 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 TBC1D16Q8TBP0 767 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
COPA-202ENST00000368069 RIMS1Q86UR5 1692 aaKnown RBP12.61□□□□□ -0.39
COPA-202ENST00000368069 RNF8O76064 485 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 PPP2R5DQ14738 602 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 FAM133BQ5BKY9 247 aaKnown RBP12.6□□□□□ -0.39
COPA-202ENST00000368069 KRT27Q7Z3Y8 459 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 LRRN4CLQ8ND94 238 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 FAM81BQ96LP2 452 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 ACTN1P12814 892 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 GPC5P78333 572 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 ADCY2Q08462 1091 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 C6orf118Q5T5N4 469 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 CDKAL1Q5VV42 579 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 ZNF746Q6NUN9 644 aaPredicted RBP12.6□□□□□ -0.39
COPA-202ENST00000368069 ZNF341Q9BYN7 854 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 MRPL47Q9HD33 250 aaKnown RBP12.6□□□□□ -0.39
COPA-202ENST00000368069 FAM217BQ9NTX9 383 aaPredicted RBP12.6□□□□□ -0.39
COPA-202ENST00000368069 HPCAL4Q9UM19 191 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 GOLGA8SH3BPF8 625 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 HIP1RO75146 1068 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms