RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PDLIM7Q9NR12 457 aa20■□□□□ 0.79
PDLIM7-202ENST00000355841 DDX19AQ9NUU7 478 aaKnown RBP20■□□□□ 0.79
PDLIM7-202ENST00000355841 TMEM39AQ9NV64 488 aa20■□□□□ 0.79
PDLIM7-202ENST00000355841 PCDHA7Q9UN72 937 aa20■□□□□ 0.79
PDLIM7-202ENST00000355841 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
PDLIM7-202ENST00000355841 TRIM43BA6NCK2 446 aa19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 DKC1O60832 514 aaKnown RBP eCLIP19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 GNAT1P11488 350 aa19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 KLRC1P26715 233 aa19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 UBA7P41226 1012 aa19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 ZNF484Q5JVG2 852 aa19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 DHX38Q92620 1227 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 TNPO1Q92973 898 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 TRIM43Q96BQ3 446 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 CEP170P1Q96L14 293 aa19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 PNMA5Q96PV4 448 aa19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 NIFKQ9BYG3 293 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 BMP2KQ9NSY1 1161 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 ZMYND8Q9ULU4 1186 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-202ENST00000355841 MBLAC1A4D2B0 266 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 RRN3P2A6NIE6 340 aa19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 LYPLA2O95372 231 aa19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 GRB10Q13322 594 aa19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 KARSQ15046 597 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 TARBP2Q15633 366 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 XKR9Q5GH70 373 aa19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 AXDND1Q5T1B0 1012 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 MTHFD1LQ6UB35 978 aa19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 KCNK18Q7Z418 384 aa19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 CYP26B1Q9NR63 512 aa19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 TRIP12Q14669 1992 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-202ENST00000355841 UMODL1Q5DID0 1318 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 C22orf31O95567 290 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 ITGB8P26012 769 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 SERINC5Q86VE9 423 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 CEP89Q96ST8 783 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 PANK2Q9BZ23 570 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 PPP1R12CQ9BZL4 782 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 FAM49AQ9H0Q0 323 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 TBX21Q9UL17 535 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 E9PMD0 336 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 SHC4Q6S5L8 630 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 OTUD6AQ7L8S5 288 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 LRRC71Q8N4P6 559 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 METTL13Q8N6R0 699 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 RASSF8Q8NHQ8 419 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 LRRC15Q8TF66 581 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 NACC1Q96RE7 527 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 SCAND2PQ9GZW5 306 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 STK24Q9Y6E0 443 aa19.97■□□□□ 0.79
PDLIM7-202ENST00000355841 COL1A2P08123 1366 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 TCHHQ07283 1943 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 CUTAO60888 179 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 MLLT1Q03111 559 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 TBC1D8BQ0IIM8 1120 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 PTK7Q13308 1070 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 CDK5RAP3Q96JB5 506 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 HIPK3Q9H422 1215 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 SUGCTQ9HAC7 445 aa19.96■□□□□ 0.79
PDLIM7-202ENST00000355841 CYP2C18P33260 490 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 RARRES1P49788 294 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 CLCN3P51790 818 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 HYIQ5T013 277 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 DNAJB3Q8WWF6 145 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 CCDC43Q96MW1 224 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 NOC4LQ9BVI4 516 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 BHMT2Q9H2M3 363 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 ANKEF1Q9NU02 776 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 PCDHA2Q9Y5H9 948 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 KAT6AQ92794 2004 aa19.95■□□□□ 0.78
PDLIM7-202ENST00000355841 A0A087X0B3 334 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 PLCG1P19174 1290 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 THPOP40225 353 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 TMEM62Q0P6H9 643 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 DRP2Q13474 957 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 TRIM71Q2Q1W2 868 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 TMEM119Q4V9L6 283 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 EFCAB12Q6NXP0 572 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 CALML4Q96GE6 196 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 CCSER1Q9C0I3 900 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 PRKAG2Q9UGJ0 569 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 DNM3Q9UQ16 869 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 KDM3AQ9Y4C1 1321 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 KIAA0355O15063 1070 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 CTSHP09668 335 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 MUTP22033 750 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 CCL23P55773 120 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 KIAA0319LQ8IZA0 1049 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 PDILTQ8N807 584 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 PPP1R16BQ96T49 567 aa19.94■□□□□ 0.78
PDLIM7-202ENST00000355841 USO1O60763 962 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 CKBP12277 381 aa19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 XRCC6P12956 609 aaKnown RBP eCLIP19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 RAG1P15918 1043 aa19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 POLGP54098 1239 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 MKRN4PQ13434 485 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 ZNF618Q5T7W0 954 aa19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 MAEAQ7L5Y9 396 aa19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 NT5C3AQ9H0P0 336 aa19.93■□□□□ 0.78
PDLIM7-202ENST00000355841 DBR1Q9UK59 544 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms