RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 AP1M1Q9BXS5 423 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 VAV3Q9UKW4 847 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 EIF3HO15372 352 aaKnown RBP eCLIP16.54■□□□□ 0.24
CSDC2-201ENST00000306149 TBCAO75347 108 aaKnown RBP16.54■□□□□ 0.24
CSDC2-201ENST00000306149 SREBF1P36956 1147 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 ATP1A2P50993 1020 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 EPHA7Q15375 998 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 RPS6KA1Q15418 735 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 MSL1Q68DK7 614 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 SLC35C1Q96A29 364 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 PDXKO00764 312 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 CALUO43852 315 aaPredicted RBP16.54■□□□□ 0.24
CSDC2-201ENST00000306149 CEP104O60308 925 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 SKOR1P84550 965 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 COG2Q14746 738 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 TAF4BQ92750 862 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 TMX4Q9H1E5 349 aaPredicted RBP16.54■□□□□ 0.24
CSDC2-201ENST00000306149 GCNT4Q9P109 453 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 LRRC37AA6NMS7 1700 aa16.54■□□□□ 0.24
CSDC2-201ENST00000306149 CFBP00751 764 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 BMP3P12645 472 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 GNGT1P63211 74 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 TMEM179Q6ZVK1 233 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 USP38Q8NB14 1042 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 SIX2Q9NPC8 291 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 A6NNZ2 444 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 TMCO5BA8MYB1 307 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 GFPT2O94808 682 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 CPP00450 1065 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 ECE1P42892 770 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 CCT5P48643 541 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 TUBB8Q3ZCM7 444 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 RINT1Q6NUQ1 792 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 DDX42Q86XP3 938 aaKnown RBP eCLIP16.53■□□□□ 0.24
CSDC2-201ENST00000306149 MYCT1Q8N699 235 aa16.53■□□□□ 0.24
CSDC2-201ENST00000306149 TYW1Q9NV66 732 aaKnown RBP16.53■□□□□ 0.24
CSDC2-201ENST00000306149 SIPA1L1O43166 1804 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 ZNF233A6NK53 670 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 KIF4AO95239 1232 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 TTC31Q49AM3 519 aaPredicted RBP16.52■□□□□ 0.24
CSDC2-201ENST00000306149 CFAP58Q5T655 872 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 COL23A1Q86Y22 540 aaPredicted RBP16.52■□□□□ 0.24
CSDC2-201ENST00000306149 FAM20AQ96MK3 541 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.24
CSDC2-201ENST00000306149 TBX3O15119 743 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 MMP10P09238 476 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 PAK2Q13177 524 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 DACT2Q5SW24 774 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 MREGQ8N565 214 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 DYDC2Q96IM9 177 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 BCS1LQ9Y276 419 aa16.52■□□□□ 0.23
CSDC2-201ENST00000306149 PDCLQ13371 301 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 HLTFQ14527 1009 aaKnown RBP eCLIP16.51■□□□□ 0.23
CSDC2-201ENST00000306149 KIAA1755Q5JYT7 1200 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 CCDC174Q6PII3 467 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 IQCKQ8N0W5 287 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 BCAS4Q8TDM0 211 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
CSDC2-201ENST00000306149 PIK3R5Q8WYR1 880 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 IDI2Q9BXS1 227 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 DDX3XO00571 662 aaKnown RBP eCLIP16.51■□□□□ 0.23
CSDC2-201ENST00000306149 ECE2O60344 883 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
CSDC2-201ENST00000306149 FOSP01100 380 aaPredicted RBP16.51■□□□□ 0.23
CSDC2-201ENST00000306149 METTL13Q8N6R0 699 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
CSDC2-201ENST00000306149 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
CSDC2-201ENST00000306149 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 SLC26A4O43511 780 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 SLITRK3O94933 977 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 FAM13AO94988 1023 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 EYA4O95677 639 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 RPL13P26373 211 aaKnown RBP16.5■□□□□ 0.23
CSDC2-201ENST00000306149 ERVK-9P63128 1117 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 PACS2Q86VP3 889 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 DDX47Q9H0S4 455 aaKnown RBP16.5■□□□□ 0.23
CSDC2-201ENST00000306149 SCN9AQ15858 1988 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 IGLV3-22A0A075B6J6 115 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 A0A087WUV0 522 aaPredicted RBP16.5■□□□□ 0.23
CSDC2-201ENST00000306149 TULP1O00294 542 aaPredicted RBP16.5■□□□□ 0.23
CSDC2-201ENST00000306149 EBAG9O00559 213 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 ITGA4P13612 1032 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 PLS1Q14651 629 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 TADA2BQ86TJ2 420 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 RDH13Q8NBN7 331 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 TPCN2Q8NHX9 752 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 ACER1Q8TDN7 264 aa16.5■□□□□ 0.23
CSDC2-201ENST00000306149 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms