RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 ERVK-9P63128 1117 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 SETQ01105 290 aaPredicted RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 ITGB3BPQ13352 177 aaPredicted RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 ASTE1Q2TB18 679 aaPredicted RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 CCDC40Q4G0X9 1142 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 ZNF572Q7Z3I7 529 aaPredicted RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 IQCDQ96DY2 449 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 SERPINA10Q9UK55 444 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 PCDHA2Q9Y5H9 948 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 FKBP1AP62942 108 aaKnown RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 E2F5Q15329 346 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 FAM83BQ5T0W9 1011 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 FBXO11Q86XK2 927 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 UBLCP1Q8WVY7 318 aaPredicted RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 ZKSCAN4Q969J2 545 aaPredicted RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 DDX47Q9H0S4 455 aaKnown RBP19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 KLC4Q9NSK0 619 aa19.46■□□□□ 0.71
TSPAN17-201ENST00000298564 MEIS1O00470 390 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 CEP104O60308 925 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 KRT18P05783 430 aaKnown RBP19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 ACTN1P12814 892 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 AP3B2Q13367 1082 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 RRP1BQ14684 758 aaKnown RBP19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 ARSHQ5FYA8 562 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 CATSPER3Q86XQ3 398 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 SLFN12Q8IYM2 578 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 SPICE1Q8N0Z3 855 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 FLAD1Q8NFF5 587 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 CRYGNQ8WXF5 182 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 CCDC114Q96M63 670 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 MBOAT7Q96N66 472 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 SCLT1Q96NL6 688 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 OPLAHO14841 1288 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 HOXA13P31271 388 aaPredicted RBP19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 HSD17B3P37058 310 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 PSMC6P62333 389 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 ITIH3Q06033 890 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 ADAT2Q7Z6V5 191 aaKnown RBP19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 ETNPPLQ8TBG4 499 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 SCFD1Q8WVM8 642 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 CYFIP2Q96F07 1278 aa19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 PRMT6Q96LA8 375 aaPredicted RBP19.45■□□□□ 0.7
TSPAN17-201ENST00000298564 PHF20L1A8MW92 1017 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 FAM86B1E9PN63 330 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 DNM1LO00429 736 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 NOL4O94818 638 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 FAM86B2P0C5J1 330 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 GSCP56915 257 aaPredicted RBP19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 SYDE2Q5VT97 1194 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 SFMBT2Q5VUG0 894 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 MDM1Q8TC05 714 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 HAUS2Q9NVX0 235 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 CNOT8Q9UFF9 292 aaKnown RBP19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 SPDYE3A6NKU9 549 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 FSBPO95073 299 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 CTNNA1P35221 906 aaKnown RBP19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 SLC12A3P55017 1021 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 SPIRE1Q08AE8 756 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 SLC9C1Q4G0N8 1177 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 GMCL1P1Q8NEA9 526 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 SLC40A1Q9NP59 571 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
TSPAN17-201ENST00000298564 A0A1W2PRG0 241 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 LCA5LO95447 670 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 ITGA4P13612 1032 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 USP8P40818 1118 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 UAP1Q16222 522 aaPredicted RBP19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 RBM26Q5T8P6 1007 aaKnown RBP19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 GMCL1Q96IK5 515 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 DDX20Q9UHI6 824 aaKnown RBP19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 NOVA2Q9UNW9 492 aaKnown RBP19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 GOLGA6L7A0A1B0GV03 622 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 GRID2IPA4D2P6 1211 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 BMP3P12645 472 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 PABPC4Q13310 644 aaKnown RBP eCLIP19.43■□□□□ 0.71e-8■■■■□ 20.2
TSPAN17-201ENST00000298564 STYK1Q6J9G0 422 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 FOXR2Q6PJQ5 311 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 CYP2W1Q8TAV3 490 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 LENG9Q96B70 501 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 CELF4Q9BZC1 486 aaKnown RBP19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 GOLGA6L10A6NI86 522 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 TMCO5BA8MYB1 307 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 MOXD1Q6UVY6 613 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 CSRNP1Q96S65 589 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 OSBPL7Q9BZF2 842 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 DPH5Q9H2P9 285 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 KCTD10Q9H3F6 313 aa19.43■□□□□ 0.7
TSPAN17-201ENST00000298564 SLX4Q8IY92 1834 aa19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 SCP2P22307 547 aa19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 COPB2P35606 906 aa19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 AMACRQ9UHK6 382 aa19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 UTRNP46939 3433 aa19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 SMIM23A6NLE4 172 aa19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 GCOM1H8Y6P7 765 aaPredicted RBP19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 PJA2O43164 708 aa19.42■□□□□ 0.7
TSPAN17-201ENST00000298564 FAM107AO95990 144 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms