RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 MyocdQ8VIM5 935 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Nop2Q922K7 793 aaKnown RBP9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ino80bQ99PT3 375 aaKnown RBP9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Scgb1b11A0A087WQJ0 93 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rtf1A2AQ19 715 aaKnown RBP9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 C6E9Q6D8 931 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Zbtb7aO88939 569 aaKnown RBP9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Prl7d1P04769 244 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 PpardP35396 440 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gjb6P70689 261 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Smarcc1P97496 1104 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Echdc2Q3TLP5 296 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Igflr1Q3U4N7 345 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tp53i13Q5F267 385 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 CcnhQ61458 323 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Smarca1Q6PGB8 1046 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 E330017A01RikQ8BU47 192 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Plekhs1Q8BW88 474 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Eml3Q8VC03 897 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Lman1lQ8VCD3 505 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Vps16Q920Q4 839 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 RtcbQ99LF4 505 aaKnown RBP9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cela3bQ9CQ52 269 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Sec13Q9D1M0 322 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 PlgrktQ9D3P8 147 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gpatch1Q9DBM1 930 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Diaph3Q9Z207 1171 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Nphp4P59240 1425 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm6588E9Q3K0 461 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 AK157302I3ITR1 129 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cyth3O08967 399 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ccdc106Q3ULM0 279 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Letm2Q7TNU7 480 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rbbp8Q80YR6 893 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cdk19Q8BWD8 501 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 P3h2Q8CG71 703 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 GaleQ8R059 347 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kif18aQ91WD7 886 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pcdhgc3Q91XX1 934 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pcdhb22Q91XZ8 794 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mrps5Q99N87 432 aaKnown RBP9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Psmd9Q9CR00 222 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ccdc130Q9D516 385 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Isca1Q9D924 129 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 AcoxlQ9DBS4 632 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Fzd9Q9R216 592 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mapk8ip3Q9ESN9 1337 aa9.94□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm13084A2A8N0 494 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm14548E9Q1Z6 680 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Nkx1-1G3UXB3 402 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm21883J3QPV3 123 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Trove2O08848 538 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 SparcP07214 302 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ucp3P56501 308 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Card10P58660 1021 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 NfiaQ02780 532 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Zscan21Q07231 555 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ipcef1Q5DU31 406 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 HadhaQ8BMS1 763 aaKnown RBP9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tmem87aQ8BXN9 555 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ttc22Q8C159 568 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Arhgef6Q8K4I3 771 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tram1l1Q8QZR0 363 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pdia5Q921X9 517 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rps6ka4Q9Z2B9 773 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mrpl40Q9Z2Q5 206 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Sos1Q62245 1319 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slc4a11A2AJN7 862 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm11756A2BEJ1 356 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Odf2A3KGV1 830 aaKnown RBP9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rbp3P49194 1234 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cyp2c39P56656 490 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ano9P86044 747 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Spc25Q3UA16 226 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slc27a5Q4LDG0 689 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Fbxw20Q5U467 468 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 CrkQ64010 304 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kdm1aQ6ZQ88 853 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tmc6Q7TN60 810 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Spata7Q80VP2 582 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tbc1d5Q80XQ2 815 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Arl8aQ8VEH3 186 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pcdhga4Q91XY4 930 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Srfbp1Q9CZ91 441 aaKnown RBP9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mphosph6Q9D1Q1 161 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 IqcdQ9D3V1 458 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 P2ry4Q9JJS7 361 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Prg4Q9JM99 1054 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Dnajb7Q9QYI8 312 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ripk3Q9QZL0 486 aa9.93□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mug2P28666 1451 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ulk4Q3V129 1303 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Znf804aA2AKY4 1200 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Lrriq4A6H6A4 596 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Zfand4D3Z3C6 739 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Serpina3jD3Z451 420 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm10471E9Q1C7 252 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 PdynO35417 248 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Nr1i3O35627 358 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kif5aP33175 1027 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms