Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Gm25239-201ENSMUST00000174915 86 ntBASIC39.07■■■■□ 3.85
Tram1l1Q8QZR0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
Tram1l1Q8QZR0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Tram1l1Q8QZR0 Gm15042-201ENSMUST00000120212 883 ntBASIC34.19■■■■□ 3.06
Tram1l1Q8QZR0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.82■■■■□ 3
Tram1l1Q8QZR0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Tram1l1Q8QZR0 Gm15045-201ENSMUST00000117359 883 ntBASIC33.42■■■□□ 2.94
Tram1l1Q8QZR0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Tram1l1Q8QZR0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Tram1l1Q8QZR0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
Tram1l1Q8QZR0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Tram1l1Q8QZR0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.66■■■□□ 2.82
Tram1l1Q8QZR0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
Tram1l1Q8QZR0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Tram1l1Q8QZR0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Tram1l1Q8QZR0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Tram1l1Q8QZR0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.63■■■□□ 2.65
Tram1l1Q8QZR0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Tram1l1Q8QZR0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Tram1l1Q8QZR0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.53■■■□□ 2.64
Tram1l1Q8QZR0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tram1l1Q8QZR0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.33■■■□□ 2.61
Tram1l1Q8QZR0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
Tram1l1Q8QZR0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Tram1l1Q8QZR0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tram1l1Q8QZR0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Tram1l1Q8QZR0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Tram1l1Q8QZR0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tram1l1Q8QZR0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Tram1l1Q8QZR0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.98■■■□□ 2.55
Tram1l1Q8QZR0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tram1l1Q8QZR0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tram1l1Q8QZR0 Psd-208ENSMUST00000224556 2034 ntBASIC30.86■■■□□ 2.53
Tram1l1Q8QZR0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.84■■■□□ 2.53
Tram1l1Q8QZR0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.82■■■□□ 2.52
Tram1l1Q8QZR0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tram1l1Q8QZR0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Tram1l1Q8QZR0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.43■■■□□ 2.46
Tram1l1Q8QZR0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
Tram1l1Q8QZR0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Tram1l1Q8QZR0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Tram1l1Q8QZR0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Tram1l1Q8QZR0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.11■■■□□ 2.41
Tram1l1Q8QZR0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Tram1l1Q8QZR0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Tram1l1Q8QZR0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.97■■■□□ 2.39
Tram1l1Q8QZR0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Tram1l1Q8QZR0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.91■■■□□ 2.38
Tram1l1Q8QZR0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.89■■■□□ 2.38
Tram1l1Q8QZR0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
Tram1l1Q8QZR0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.76■■■□□ 2.35
Tram1l1Q8QZR0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Tram1l1Q8QZR0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Tram1l1Q8QZR0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.61■■■□□ 2.33
Tram1l1Q8QZR0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.56■■■□□ 2.32
Tram1l1Q8QZR0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Tram1l1Q8QZR0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.54■■■□□ 2.32
Tram1l1Q8QZR0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Tram1l1Q8QZR0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Tram1l1Q8QZR0 Rab21-202ENSMUST00000218831 843 ntBASIC29.41■■■□□ 2.3
Tram1l1Q8QZR0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.32■■■□□ 2.28
Tram1l1Q8QZR0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Tram1l1Q8QZR0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Tram1l1Q8QZR0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.29■■■□□ 2.28
Tram1l1Q8QZR0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tram1l1Q8QZR0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tram1l1Q8QZR0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Tram1l1Q8QZR0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Tram1l1Q8QZR0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Tram1l1Q8QZR0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.11■■■□□ 2.25
Tram1l1Q8QZR0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tram1l1Q8QZR0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Tram1l1Q8QZR0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.06■■■□□ 2.24
Tram1l1Q8QZR0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Tram1l1Q8QZR0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tram1l1Q8QZR0 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.02■■■□□ 2.24
Tram1l1Q8QZR0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Tram1l1Q8QZR0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.97■■■□□ 2.23
Tram1l1Q8QZR0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Tram1l1Q8QZR0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Tram1l1Q8QZR0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.95■■■□□ 2.22
Tram1l1Q8QZR0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tram1l1Q8QZR0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
Tram1l1Q8QZR0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tram1l1Q8QZR0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Tram1l1Q8QZR0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tram1l1Q8QZR0 Gm26115-201ENSMUST00000175605 87 ntBASIC28.78■■■□□ 2.2
Tram1l1Q8QZR0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.75■■■□□ 2.19
Tram1l1Q8QZR0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.75■■■□□ 2.19
Tram1l1Q8QZR0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tram1l1Q8QZR0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Tram1l1Q8QZR0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tram1l1Q8QZR0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.69■■■□□ 2.18
Tram1l1Q8QZR0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Tram1l1Q8QZR0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Tram1l1Q8QZR0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Tram1l1Q8QZR0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.63■■■□□ 2.17
Tram1l1Q8QZR0 Gm8109-201ENSMUST00000194076 746 ntBASIC28.62■■■□□ 2.17
Tram1l1Q8QZR0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.58■■■□□ 2.17
Tram1l1Q8QZR0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.51■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms