RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Oit3Q8R4V5 546 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ankrd1Q9CR42 319 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Arhgap8Q9CXP4 425 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tacc2Q9JJG0 1149 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Grin2dQ03391 1323 aa16.27■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ccdc173A0JLY1 547 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Klhl34A2AI76 644 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Vmn2r79E9Q067 851 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pitpnm1O35954 1243 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Cyp11b2P15539 500 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Trim43cP86449 446 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Grm1P97772 1199 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ppm1jQ149T7 507 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Naa35Q6PHQ8 725 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ube2q1Q7TSS2 422 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Q8BZJ8 459 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Fam126bQ8C729 530 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Sox30Q8CGW4 782 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Rbm41Q8JZV4 413 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Slc14a1Q8VHL0 384 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pcdhac2Q91Y09 1006 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Prmt7Q922X9 692 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pls3Q99K51 630 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Emc2Q9CRD2 297 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Rhobtb3Q9CTN4 611 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Chd1lQ9CXF7 900 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Mis18aQ9CZJ6 204 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Arhgef7Q9ES28 862 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Slc6a21A0A1B0GSD2 748 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Spocd1B1ASB6 936 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Jakmip2D3YXK0 820 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ddx23D3Z0M9 819 aaKnown RBP16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Magea4F2Z493 315 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Gm5624F6ZZG8 207 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Nkx1-1G3UXB3 402 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Exoc4O35382 975 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ccr1P51675 355 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ccdc162pQ0VG85 912 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Wdr70Q3TWF6 657 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Adamts18Q4VC17 1219 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Mkrn3Q60764 544 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Phlda1Q62392 405 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Dhx40Q6PE54 779 aaKnown RBP16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Eif4bQ8BGD9 611 aaKnown RBP16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Rassf10Q8BL43 508 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Csgalnact2Q8C1F4 542 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Spata32Q8C5V0 334 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Usp20Q8C6M1 916 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Enox2Q8R0Z2 598 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Q9CYI0 393 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Efhd1Q9D4J1 240 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Tmem206Q9D771 350 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Serpinb12Q9D7P9 423 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Alg13Q9D8C3 1166 aaKnown RBP16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 PorcnQ9JJJ7 461 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Fmnl1Q9JL26 1094 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Myl7Q9QVP4 175 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Hebp1Q9R257 190 aa16.26■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Trip11E9Q512 1976 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Myh9Q8VDD5 1960 aaKnown RBP16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Fam184aE9PW83 1143 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Slc6a20bO88575 635 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Abcb4P21440 1276 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 CiitaP79621 1155 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Tp53i13Q5F267 385 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 FcgrtQ61559 365 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Rbm12b2Q66JV4 834 aaKnown RBP16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Rnf214Q8BFU3 668 aaKnown RBP16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Dusp4Q8BFV3 398 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Lrrc41Q8K1C9 807 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Adcy3Q8VHH7 1145 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Prkag2Q91WG5 566 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pcdhgc5Q91XW9 944 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 2310002L09RikQ9D7L5 217 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Mettl7bQ9DD20 244 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pold3Q9EQ28 462 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Tex21Q9R0U9 575 aa16.25■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Nmt1O70310 496 aaKnown RBP16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Hoxc8P09025 242 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Hoxb13P70321 286 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pstpip1P97814 415 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Drp2Q05AA6 957 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Cyp2c29Q64458 490 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Gemin4Q6P6L6 1058 aaKnown RBP16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Kdm1aQ6ZQ88 853 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Fam205cQ80YD3 371 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Enox1Q8BHR2 643 aaKnown RBP16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Grik4Q8BMF5 956 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Agbl2Q8CDK2 862 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Mamdc2Q8CG85 686 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pcdha12Q91Y18 950 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Polr3fQ921X6 316 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Q9D5Q8 446 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Xrn2Q9DBR1 951 aaKnown RBP16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Fut2Q9JL27 347 aa16.24■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Vmn2r78K7N6U5 853 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Surf1P09925 306 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 PtmaP26350 111 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Nek1P51954 1203 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Capn13Q3UW68 665 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms