RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC42	YLR229C	ROT2	P38138	954 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	YBR071W	P38243	211 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	YHR045W	P38775	560 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	IPI1	P38803	334 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC42	YLR229C	SOP4	P39543	234 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC42	YLR229C	EXO1	P39875	702 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	PAN6	P40459	309 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	FKH2	P41813	862 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	IME4	P41833	600 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	FET5	P43561	622 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	APS3	P47064	194 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	ARE2	P53629	642 aa	Known RBP	4.21	□□□□□ -1.74
CDC42	YLR229C	YNL143C	P53908	130 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	ARP4	P80428	489 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	ATG38	Q05789	226 aa	Known RBP	4.21	□□□□□ -1.74
CDC42	YLR229C	YPR114W	Q06107	315 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	RIF2	Q06208	395 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	DBP9	Q06218	594 aa	Known RBP	4.21	□□□□□ -1.74
CDC42	YLR229C	GPI11	Q06636	219 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	VPS36	Q06696	566 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	GRS2	Q06817	618 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	YLR049C	Q12110	428 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	YLR046C	Q12253	270 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	YOR214C	Q12282	236 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	YLR422W	Q06409	1932 aa		4.21	□□□□□ -1.74
CDC42	YLR229C	ARG3	P05150	338 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	HIS3	P06633	220 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	HIP1	P06775	603 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	GUK1	P15454	187 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	PHO81	P17442	1178 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	SIR1	P21691	654 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	RPL24B	P24000	155 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	PEX34	P25584	144 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	MRPL9	P31334	269 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	ARP2	P32381	391 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	DCG1	P32460	244 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	RPS1A	P33442	255 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	THI80	P35202	319 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	PHO11	P35842	467 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	ANR2	P36090	516 aa	Predicted RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	CAF4	P36130	643 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	ARA1	P38115	344 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	MUM2	P38236	366 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	PHO12	P38693	467 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	DHH1	P39517	506 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	YER034W	P40022	185 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	EMP65	P40085	556 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	MEP1	P40260	492 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	SER2	P42941	309 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	DIE2	P50076	525 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	NAS6	P50086	228 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	SHY1	P53266	389 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	DID2	P69771	204 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	ARG5,6	Q01217	863 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	RRN5	Q02983	363 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	YMR099C	Q03161	297 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	PIR1	Q03178	341 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	SEG1	Q04279	960 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	ASM4	Q05166	528 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	YPS7	Q06325	596 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	COS7	Q07788	383 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	FEX1	Q08913	375 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	HUA2	Q12134	243 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	RBD2	Q12270	262 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	YPR1	Q12458	312 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	SKM1	Q12469	655 aa		4.2	□□□□□ -1.74
CDC42	YLR229C	LSO2	Q3E772	92 aa	Known RBP	4.2	□□□□□ -1.74
CDC42	YLR229C	SPT3	P06844	337 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	IDP1	P21954	428 aa	Known RBP	4.19	□□□□□ -1.74
CDC42	YLR229C	ATG22	P25568	528 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	URK1	P27515	501 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	CIN8	P27895	1000 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	CTS1	P29029	562 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	NTG1	P31378	399 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	SPT14	P32363	452 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	PRP18	P33411	251 aa	Predicted RBP	4.19	□□□□□ -1.74
CDC42	YLR229C	MRPL17	P36528	281 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	GPX2	P38143	162 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	MBA1	P38300	278 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	DUN1	P39009	513 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	GIP4	P39732	760 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	RPH1	P39956	796 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	YEL020C	P39994	560 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	HEM14	P40012	539 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	RTT105	P40063	208 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	BUR6	P40096	142 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	SWM2	P40342	146 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	HXT9	P40885	567 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	MNN5	P46982	586 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	LSM1	P47017	172 aa	Known RBP	4.19	□□□□□ -1.74
CDC42	YLR229C	YJR120W	P47157	116 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	GTO1	P48239	356 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	PRM1	P53835	661 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	NUP49	Q02199	472 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	PFA5	Q03289	374 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	ECM11	Q04110	302 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	VTA1	Q06263	330 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	RRP9	Q06506	573 aa	Known RBP	4.19	□□□□□ -1.74
CDC42	YLR229C	SWA2	Q06677	668 aa		4.19	□□□□□ -1.74
CDC42	YLR229C	YLL007C	Q07799	665 aa		4.19	□□□□□ -1.74

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