RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C EMG1Q06287 252 aaKnown RBP12.1□□□□□ -0.47
PHO4YFR034C YDL114WQ07530 308 aa12.1□□□□□ -0.47
PHO4YFR034C GSH2Q08220 491 aa12.1□□□□□ -0.47
PHO4YFR034C YOR389WQ08912 624 aa12.1□□□□□ -0.47
PHO4YFR034C GLO4Q12320 285 aa12.1□□□□□ -0.47
PHO4YFR034C BEM2P39960 2167 aaKnown RBP12.09□□□□□ -0.47
PHO4YFR034C YMR084WA2P2R3 262 aa12.09□□□□□ -0.47
PHO4YFR034C RNQ1P25367 405 aa12.09□□□□□ -0.47
PHO4YFR034C TAH1P25638 111 aaPredicted RBP12.09□□□□□ -0.47
PHO4YFR034C SRB5P32585 307 aa12.09□□□□□ -0.47
PHO4YFR034C TED1P40533 473 aa12.09□□□□□ -0.47
PHO4YFR034C NQM1P53228 333 aaPredicted RBP12.09□□□□□ -0.47
PHO4YFR034C NEJ1Q06148 342 aa12.09□□□□□ -0.47
PHO4YFR034C YDR262WQ12331 272 aa12.09□□□□□ -0.47
PHO4YFR034C IES3Q12345 250 aa12.09□□□□□ -0.47
PHO4YFR034C IDP1P21954 428 aaKnown RBP12.08□□□□□ -0.48
PHO4YFR034C HCM1P25364 564 aa12.08□□□□□ -0.48
PHO4YFR034C ASF2P32448 525 aaPredicted RBP12.08□□□□□ -0.48
PHO4YFR034C TPO5P36029 618 aa12.08□□□□□ -0.48
PHO4YFR034C YBR139WP38109 508 aa12.08□□□□□ -0.48
PHO4YFR034C ARN2P38724 620 aa12.08□□□□□ -0.48
PHO4YFR034C MNL1P38888 796 aa12.08□□□□□ -0.48
PHO4YFR034C TAT2P38967 592 aa12.08□□□□□ -0.48
PHO4YFR034C ALR2P43553 858 aa12.08□□□□□ -0.48
PHO4YFR034C RET2P43621 546 aa12.08□□□□□ -0.48
PHO4YFR034C SYF2P53277 215 aaPredicted RBP12.08□□□□□ -0.48
PHO4YFR034C MTQ1P53944 314 aa12.08□□□□□ -0.48
PHO4YFR034C YSA1Q01976 231 aa12.08□□□□□ -0.48
PHO4YFR034C RRP17Q04031 235 aaPredicted RBP12.08□□□□□ -0.48
PHO4YFR034C GAL83Q04739 417 aa12.08□□□□□ -0.48
PHO4YFR034C RNH1Q04740 348 aa12.08□□□□□ -0.48
PHO4YFR034C VPS36Q06696 566 aa12.08□□□□□ -0.48
PHO4YFR034C IRC13Q08630 104 aa12.08□□□□□ -0.48
PHO4YFR034C FDH1Q08911 376 aa12.08□□□□□ -0.48
PHO4YFR034C YPL191CQ08930 360 aa12.08□□□□□ -0.48
PHO4YFR034C LEU9Q12166 604 aaKnown RBP12.08□□□□□ -0.48
PHO4YFR034C ARE1P25628 610 aa12.07□□□□□ -0.48
PHO4YFR034C PRP19P32523 503 aaKnown RBP12.07□□□□□ -0.48
PHO4YFR034C NRP1P32770 719 aaKnown RBP RIP-Chip data12.07□□□□□ -0.48not detected
PHO4YFR034C YRO2P38079 344 aa12.07□□□□□ -0.48
PHO4YFR034C HOC1P47124 396 aa12.07□□□□□ -0.48
PHO4YFR034C ATF2P53296 535 aa12.07□□□□□ -0.48
PHO4YFR034C NUP49Q02199 472 aa12.07□□□□□ -0.48
PHO4YFR034C ELP4Q02884 456 aaKnown RBP12.07□□□□□ -0.48
PHO4YFR034C MDM36Q06820 579 aa12.07□□□□□ -0.48
PHO4YFR034C YOR019WQ99248 730 aa12.07□□□□□ -0.48
PHO4YFR034C TRM1P15565 570 aaKnown RBP12.06□□□□□ -0.48
PHO4YFR034C THR1P17423 357 aaKnown RBP12.06□□□□□ -0.48
PHO4YFR034C SBE22P38814 852 aa12.06□□□□□ -0.48
PHO4YFR034C RPS12P48589 143 aaKnown RBP12.06□□□□□ -0.48
PHO4YFR034C NUP57P48837 541 aa12.06□□□□□ -0.48
PHO4YFR034C FES1P38260 290 aa12.05□□□□□ -0.48
PHO4YFR034C HMS2P47175 358 aa12.05□□□□□ -0.48
PHO4YFR034C IMD4P50094 524 aaKnown RBP12.05□□□□□ -0.48
PHO4YFR034C REC102Q02721 264 aa12.05□□□□□ -0.48
PHO4YFR034C ABZ2Q03266 374 aa12.05□□□□□ -0.48
PHO4YFR034C RRN11Q04712 507 aa12.05□□□□□ -0.48
PHO4YFR034C MRX10Q05648 414 aa12.05□□□□□ -0.48
PHO4YFR034C YLR446WQ06204 433 aa12.05□□□□□ -0.48
PHO4YFR034C SIA1Q12212 622 aa12.05□□□□□ -0.48
PHO4YFR034C RBD2Q12270 262 aa12.05□□□□□ -0.48
PHO4YFR034C MOD5P07884 428 aa12.04□□□□□ -0.48
PHO4YFR034C CBS1P14066 229 aa12.04□□□□□ -0.48
PHO4YFR034C PRP2P20095 876 aaPredicted RBP12.04□□□□□ -0.48
PHO4YFR034C JHD2P47156 728 aaPredicted RBP12.04□□□□□ -0.48
PHO4YFR034C AAD10P47182 288 aa12.04□□□□□ -0.48
PHO4YFR034C MPC1P53157 130 aaKnown RBP12.04□□□□□ -0.48
PHO4YFR034C ART5P53244 586 aaKnown RBP12.04□□□□□ -0.48
PHO4YFR034C MEP3P53390 489 aa12.04□□□□□ -0.48
PHO4YFR034C SUN4P53616 420 aa12.04□□□□□ -0.48
PHO4YFR034C MGR3Q04472 501 aa12.04□□□□□ -0.48
PHO4YFR034C NAT4Q04751 285 aa12.04□□□□□ -0.48
PHO4YFR034C PNS1Q12412 539 aa12.04□□□□□ -0.48
PHO4YFR034C YOL163WP0CF20 169 aa12.03□□□□□ -0.48
PHO4YFR034C YCK1P23291 538 aa12.03□□□□□ -0.48
PHO4YFR034C YMC1P32331 307 aa12.03□□□□□ -0.48
PHO4YFR034C OAC1P32332 324 aa12.03□□□□□ -0.48
PHO4YFR034C HIR2P32480 875 aa12.03□□□□□ -0.48
PHO4YFR034C MSN2P33748 704 aa12.03□□□□□ -0.48
PHO4YFR034C BAP2P38084 609 aa12.03□□□□□ -0.48
PHO4YFR034C SEA4P38164 1038 aa12.03□□□□□ -0.48
PHO4YFR034C MBP1P39678 833 aa12.03□□□□□ -0.48
PHO4YFR034C PRP39P39682 629 aaKnown RBP12.03□□□□□ -0.48
PHO4YFR034C DDI1P40087 428 aa12.03□□□□□ -0.48
PHO4YFR034C CHA4P43634 648 aa12.03□□□□□ -0.48
PHO4YFR034C EXG2P52911 562 aa12.03□□□□□ -0.48
PHO4YFR034C GPI17Q04080 534 aa12.03□□□□□ -0.48
PHO4YFR034C CDC12P32468 407 aaKnown RBP12.02□□□□□ -0.49
PHO4YFR034C LYP1P32487 611 aa12.02□□□□□ -0.49
PHO4YFR034C AUR1P36107 401 aaPredicted RBP12.02□□□□□ -0.49
PHO4YFR034C JLP2P40206 208 aa12.02□□□□□ -0.49
PHO4YFR034C YTA6P40328 754 aa12.02□□□□□ -0.49
PHO4YFR034C YNR014WP53719 212 aa12.02□□□□□ -0.49
PHO4YFR034C SNZ1Q03148 297 aa12.02□□□□□ -0.49
PHO4YFR034C CTL1Q03220 320 aaKnown RBP12.02□□□□□ -0.49
PHO4YFR034C YML053CQ04978 212 aa12.02□□□□□ -0.49
PHO4YFR034C RPS21BQ3E754 87 aaKnown RBP12.02□□□□□ -0.49
PHO4YFR034C MDH1P17505 334 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
PHO4YFR034C DHR2P36009 735 aaPredicted RBP12.01□□□□□ -0.49
PHO4YFR034C GID8P40208 455 aa12.01□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms