RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W APC4Q04601 652 aa2.13□□□□□ -2.07
MCD1YDL003W YMR034CQ05131 434 aaPredicted RBP2.13□□□□□ -2.07
MCD1YDL003W PHM6Q05637 104 aa2.13□□□□□ -2.07
MCD1YDL003W YLR297WQ05899 129 aa2.13□□□□□ -2.07
MCD1YDL003W ARR3Q06598 404 aa2.13□□□□□ -2.07
MCD1YDL003W ASA1Q06822 443 aa2.13□□□□□ -2.07
MCD1YDL003W YEH1Q07804 573 aa2.13□□□□□ -2.07
MCD1YDL003W THI20Q08224 551 aa2.13□□□□□ -2.07
MCD1YDL003W IMA2Q08295 589 aa2.13□□□□□ -2.07
MCD1YDL003W YPL199CQ08954 240 aa2.13□□□□□ -2.07
MCD1YDL003W YOL107WQ12239 342 aa2.13□□□□□ -2.07
MCD1YDL003W RRD2Q12461 358 aa2.13□□□□□ -2.07
MCD1YDL003W HSH49Q99181 213 aaPredicted RBP2.13□□□□□ -2.07
MCD1YDL003W MPD2Q99316 277 aa2.13□□□□□ -2.07
MCD1YDL003W TY1B-BRQ12193 1756 aa2.12□□□□□ -2.07
MCD1YDL003W TY1B-GR3Q12316 1755 aa2.12□□□□□ -2.07
MCD1YDL003W TY1B-ORQ92393 1755 aa2.12□□□□□ -2.07
MCD1YDL003W CET1O13297 549 aaPredicted RBP2.12□□□□□ -2.07
MCD1YDL003W FOB1O13329 566 aa2.12□□□□□ -2.07
MCD1YDL003W CAR1P00812 333 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W RHO1P06780 209 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W COS2P0CX12 379 aa2.12□□□□□ -2.07
MCD1YDL003W COS3P0CX13 379 aa2.12□□□□□ -2.07
MCD1YDL003W SNF3P10870 884 aa2.12□□□□□ -2.07
MCD1YDL003W NSP1P14907 823 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W CCA1P21269 546 aa2.12□□□□□ -2.07
MCD1YDL003W RPS1BP23248 255 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W GIT1P25346 518 aa2.12□□□□□ -2.07
MCD1YDL003W CTR86P25355 563 aa2.12□□□□□ -2.07
MCD1YDL003W CIN8P27895 1000 aa2.12□□□□□ -2.07
MCD1YDL003W UBC8P28263 218 aa2.12□□□□□ -2.07
MCD1YDL003W CHS3P29465 1165 aa2.12□□□□□ -2.07
MCD1YDL003W NDI1P32340 513 aa2.12□□□□□ -2.07
MCD1YDL003W SRB6P32570 121 aa2.12□□□□□ -2.07
MCD1YDL003W MUD1P32605 298 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W PPQ1P32945 549 aa2.12□□□□□ -2.07
MCD1YDL003W RPS1AP33442 255 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W SPO23P33757 523 aa2.12□□□□□ -2.07
MCD1YDL003W SRB2P34162 210 aa2.12□□□□□ -2.07
MCD1YDL003W SIP2P34164 415 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W CBT1P36038 271 aaPredicted RBP2.12□□□□□ -2.07
MCD1YDL003W AIM29P36154 155 aa2.12□□□□□ -2.07
MCD1YDL003W SKG1P36169 355 aa2.12□□□□□ -2.07
MCD1YDL003W MRPL3P36516 390 aa2.12□□□□□ -2.07
MCD1YDL003W STV1P37296 890 aa2.12□□□□□ -2.07
MCD1YDL003W ECM13P38195 257 aa2.12□□□□□ -2.07
MCD1YDL003W SIF2P38262 535 aa2.12□□□□□ -2.07
MCD1YDL003W ERG7P38604 731 aa2.12□□□□□ -2.07
MCD1YDL003W YHR182WP38870 785 aa2.12□□□□□ -2.07
MCD1YDL003W LNP1P38878 278 aa2.12□□□□□ -2.07
MCD1YDL003W EGD2P38879 174 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W CYC2P38909 366 aa2.12□□□□□ -2.07
MCD1YDL003W YJL193WP39542 402 aa2.12□□□□□ -2.07
MCD1YDL003W PTI1P39927 425 aaPredicted RBP2.12□□□□□ -2.07
MCD1YDL003W YER184CP39961 794 aa2.12□□□□□ -2.07
MCD1YDL003W TPA1P40032 644 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W LSM4P40070 187 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W NDE1P40215 560 aa2.12□□□□□ -2.07
MCD1YDL003W YIL152WP40455 235 aa2.12□□□□□ -2.07
MCD1YDL003W ASG1P40467 964 aa2.12□□□□□ -2.07
MCD1YDL003W ERG10P41338 398 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W IRC18P47056 224 aa2.12□□□□□ -2.07
MCD1YDL003W CPR7P47103 393 aa2.12□□□□□ -2.07
MCD1YDL003W HOC1P47124 396 aa2.12□□□□□ -2.07
MCD1YDL003W UBC12P52491 188 aa2.12□□□□□ -2.07
MCD1YDL003W PMT5P52867 743 aa2.12□□□□□ -2.07
MCD1YDL003W TPN1P53099 579 aa2.12□□□□□ -2.07
MCD1YDL003W YGL036WP53185 909 aaPredicted RBP2.12□□□□□ -2.07
MCD1YDL003W YGR026WP53217 278 aa2.12□□□□□ -2.07
MCD1YDL003W NQM1P53228 333 aaPredicted RBP2.12□□□□□ -2.07
MCD1YDL003W RCF2P53721 224 aa2.12□□□□□ -2.07
MCD1YDL003W CUS2P53830 285 aaPredicted RBP2.12□□□□□ -2.07
MCD1YDL003W FOL1P53848 824 aa2.12□□□□□ -2.07
MCD1YDL003W YNL095CP53932 642 aa2.12□□□□□ -2.07
MCD1YDL003W HXT11P54862 567 aa2.12□□□□□ -2.07
MCD1YDL003W RMT2Q03305 412 aa2.12□□□□□ -2.07
MCD1YDL003W PRP42Q03776 544 aaKnown RBP2.12□□□□□ -2.07
MCD1YDL003W PRM6Q04705 352 aa2.12□□□□□ -2.07
MCD1YDL003W YMR317WQ04893 1140 aa2.12□□□□□ -2.07
MCD1YDL003W TFC6Q06339 672 aa2.12□□□□□ -2.07
MCD1YDL003W YLR352WQ06479 807 aa2.12□□□□□ -2.07
MCD1YDL003W YET3Q07451 203 aa2.12□□□□□ -2.07
MCD1YDL003W CRT10Q08226 957 aa2.12□□□□□ -2.07
MCD1YDL003W AEP3Q12089 606 aa2.12□□□□□ -2.07
MCD1YDL003W NSL1Q12143 216 aa2.12□□□□□ -2.07
MCD1YDL003W YOR114WQ12219 294 aa2.12□□□□□ -2.07
MCD1YDL003W FYV7Q12247 151 aa2.12□□□□□ -2.07
MCD1YDL003W MED1Q12321 566 aa2.12□□□□□ -2.07
MCD1YDL003W GPM3Q12326 303 aa2.12□□□□□ -2.07
MCD1YDL003W MHF1Q3E835 90 aa2.12□□□□□ -2.07
MCD1YDL003W AFI1Q99222 893 aa2.12□□□□□ -2.07
MCD1YDL003W SAS5Q99314 248 aa2.12□□□□□ -2.07
MCD1YDL003W CDC28P00546 298 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W ATP2P00830 511 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W RAD10P06838 210 aa2.11□□□□□ -2.07
MCD1YDL003W PET54P10834 293 aa2.11□□□□□ -2.07
MCD1YDL003W ARO3P14843 370 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W CBS2P14905 389 aa2.11□□□□□ -2.07
MCD1YDL003W CDC23P16522 626 aa2.11□□□□□ -2.07
MCD1YDL003W MET16P18408 261 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms