RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 A6NJR5 290 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 H0YGN5 161 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 OATP04181 439 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 GNAT1P11488 350 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 PLCG1P19174 1290 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 YWHABP31946 246 aaKnown RBP14.46□□□□□ -0.09
PHGDH-218ENST00000641491 GRIN1Q05586 938 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 SPIRE1Q08AE8 756 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 IL17AQ16552 155 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 XKR3Q5GH77 459 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 FAM47CQ5HY64 1035 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 AXDND1Q5T1B0 1012 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-218ENST00000641491 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 SHC4Q6S5L8 630 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 SV2BQ7L1I2 683 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 CCDC60Q8IWA6 550 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-218ENST00000641491 C7orf31Q8N865 590 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 SLC17A8Q8NDX2 589 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 GLT1D1Q96MS3 346 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 JPH2Q9BR39 696 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-218ENST00000641491 PANK2Q9BZ23 570 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 UPF3AQ9H1J1 476 aaKnown RBP14.46□□□□□ -0.09
PHGDH-218ENST00000641491 RGL1Q9NZL6 768 aa14.46□□□□□ -0.09
PHGDH-218ENST00000641491 GSTTP1A0A1W2PQM5 241 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 H3BRB1 525 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 MED24O75448 989 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 IGHA2P01877 340 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 DHX8Q14562 1220 aaKnown RBP14.45□□□□□ -0.1
PHGDH-218ENST00000641491 MFSD10Q14728 455 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 XKR9Q5GH70 373 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 CATSPER3Q86XQ3 398 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 C4orf19Q8IY42 314 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 AFAP1L1Q8TED9 768 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-218ENST00000641491 LARP4BQ92615 738 aaKnown RBP14.45□□□□□ -0.1
PHGDH-218ENST00000641491 CEP170P1Q96L14 293 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 TUT1Q9H6E5 874 aaKnown RBP14.45□□□□□ -0.1
PHGDH-218ENST00000641491 NOD1Q9Y239 953 aa14.45□□□□□ -0.1
PHGDH-218ENST00000641491 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 HBP1O60381 514 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 LGR5O75473 907 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 SLITRK3O94933 977 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 ATG7O95352 703 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 CST5P28325 142 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-218ENST00000641491 NDUFA8P51970 172 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-218ENST00000641491 LRRC41Q15345 812 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 MTFR1Q15390 333 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 KCNA10Q16322 511 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 MTERF2Q49AM1 385 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 ATP8B4Q8TF62 1192 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 SLC7A3Q8WY07 619 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 TSEN34Q9BSV6 310 aaKnown RBP14.44□□□□□ -0.1
PHGDH-218ENST00000641491 PAK6Q9NQU5 681 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-218ENST00000641491 ANKEF1Q9NU02 776 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 PPME1Q9Y570 386 aa14.44□□□□□ -0.1
PHGDH-218ENST00000641491 DOCK3Q8IZD9 2030 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-218ENST00000641491 DNM1LO00429 736 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 ADCY6O43306 1168 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-218ENST00000641491 TBCAO75347 108 aaKnown RBP14.43□□□□□ -0.1
PHGDH-218ENST00000641491 ZNF202O95125 648 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 EYA4O95677 639 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 ASGR1P07306 291 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 GJB1P08034 283 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 PLA2G4BP0C869 781 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 TMOD1P28289 359 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 PSEN2P49810 448 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 IGBP1P78318 339 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 TBC1D8BQ0IIM8 1120 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 PPFIA1Q13136 1202 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 KIAA0753Q2KHM9 967 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 TMEM119Q4V9L6 283 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 TMEM63BQ5T3F8 832 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 B3GNT9Q6UX72 402 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 PIGOQ8TEQ8 1089 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 U2AF1L4Q8WU68 220 aaKnown RBP14.43□□□□□ -0.1
PHGDH-218ENST00000641491 RAD54LQ92698 747 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 HSD17B14Q9BPX1 270 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 BHMT2Q9H2M3 363 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 BCAS3Q9H6U6 928 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 STARD7Q9NQZ5 370 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 LMBRD1Q9NUN5 540 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 MAFBQ9Y5Q3 323 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-218ENST00000641491 MCM3APO60318 1980 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 KIAA1217Q5T5P2 1943 aa14.43□□□□□ -0.1
PHGDH-218ENST00000641491 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 ADAMTS4O75173 837 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 SMC2O95347 1197 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 LYPLA2O95372 231 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 SGPL1O95470 568 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 F2P00734 622 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 XRCC6P12956 609 aaKnown RBP eCLIP14.42□□□□□ -0.15e-6■■□□□ 11.5
PHGDH-218ENST00000641491 PTGS1P23219 599 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 DNM2P50570 870 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 PURAQ00577 322 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms