RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 IFNAR1P17181 557 aa22.83■■□□□ 1.25
CLN6-222ENST00000637667 PDIA3P30101 505 aaKnown RBP22.83■■□□□ 1.25
CLN6-222ENST00000637667 EPC2Q52LR7 807 aa22.83■■□□□ 1.25
CLN6-222ENST00000637667 FAM160B1Q5W0V3 765 aa22.83■■□□□ 1.25
CLN6-222ENST00000637667 IL17RAQ96F46 866 aa22.83■■□□□ 1.25
CLN6-222ENST00000637667 SLC26A6Q9BXS9 759 aa22.83■■□□□ 1.25
CLN6-222ENST00000637667 AGO3Q9H9G7 860 aaKnown RBP22.83■■□□□ 1.25
CLN6-222ENST00000637667 TRPV2Q9Y5S1 764 aa22.83■■□□□ 1.25
CLN6-222ENST00000637667 ENPP3O14638 875 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 SETQ01105 290 aaPredicted RBP22.82■■□□□ 1.24
CLN6-222ENST00000637667 CCDC60Q8IWA6 550 aaPredicted RBP22.82■■□□□ 1.24
CLN6-222ENST00000637667 CCDC148Q8NFR7 591 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 BICD2Q8TD16 824 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 RASGRP4Q8TDF6 673 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 ATP8B4Q8TF62 1192 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 UIMC1Q96RL1 719 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 ZNF577Q9BSK1 485 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 NCOA5Q9HCD5 579 aaKnown RBP22.82■■□□□ 1.24
CLN6-222ENST00000637667 SQORQ9Y6N5 450 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 SIP14410 1827 aa22.82■■□□□ 1.24
CLN6-222ENST00000637667 MUC3AQ02505 3323 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 M0QZ92 97 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 HBP1O60381 514 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 CD52P31358 61 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 CCT2P78371 535 aaKnown RBP22.81■■□□□ 1.24
CLN6-222ENST00000637667 TMEM62Q0P6H9 643 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 MIS18BP1Q6P0N0 1132 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 PDXDC2PQ6P474 469 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 MTHFD1LQ6UB35 978 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 RUFY3Q7L099 469 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 TMEM192Q8IY95 271 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 NECAB3Q96P71 396 aaPredicted RBP22.81■■□□□ 1.24
CLN6-222ENST00000637667 ZSWIM6Q9HCJ5 1215 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 ZNF302Q9NR11 478 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 TBC1D22BQ9NU19 505 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 COL4A6Q14031 1691 aa22.81■■□□□ 1.24
CLN6-222ENST00000637667 SMIM35A0A1B0GVV1 85 aa22.8■■□□□ 1.24
CLN6-222ENST00000637667 CIITAP33076 1130 aa22.8■■□□□ 1.24
CLN6-222ENST00000637667 TOB2Q14106 344 aaPredicted RBP22.8■■□□□ 1.24
CLN6-222ENST00000637667 PTPROQ16827 1216 aa22.8■■□□□ 1.24
CLN6-222ENST00000637667 PRR16Q569H4 304 aa22.8■■□□□ 1.24
CLN6-222ENST00000637667 NME8Q8N427 588 aa22.8■■□□□ 1.24
CLN6-222ENST00000637667 MRPL38Q96DV4 380 aaKnown RBP22.8■■□□□ 1.24
CLN6-222ENST00000637667 VPS54Q9P1Q0 977 aa22.8■■□□□ 1.24
CLN6-222ENST00000637667 H3BNC9 293 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 KLRC1P26715 233 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 GPM6BQ13491 265 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 ZNF746Q6NUN9 644 aaPredicted RBP22.79■■□□□ 1.24
CLN6-222ENST00000637667 SWSAP1Q6NVH7 229 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 FIBCD1Q8N539 461 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 LINC01599Q8WXQ3 324 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 CELF4Q9BZC1 486 aaKnown RBP22.79■■□□□ 1.24
CLN6-222ENST00000637667 CYP46A1Q9Y6A2 500 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 MYO7AQ13402 2215 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 IGSF9BQ9UPX0 1349 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 KDM3AQ9Y4C1 1321 aa22.79■■□□□ 1.24
CLN6-222ENST00000637667 TCF20Q9UGU0 1960 aaKnown RBP22.78■■□□□ 1.24
CLN6-222ENST00000637667 XIRP2A4UGR9 3374 aa22.78■■□□□ 1.24
CLN6-222ENST00000637667 KRT76Q01546 638 aa22.78■■□□□ 1.24
CLN6-222ENST00000637667 ZNF484Q5JVG2 852 aa22.78■■□□□ 1.24
CLN6-222ENST00000637667 FTHL17Q9BXU8 183 aa22.78■■□□□ 1.24
CLN6-222ENST00000637667 RC3H2Q9HBD1 1191 aaKnown RBP22.78■■□□□ 1.24
CLN6-222ENST00000637667 SH3GLB2Q9NR46 395 aa22.78■■□□□ 1.24
CLN6-222ENST00000637667 TCEAL9Q9UHQ7 104 aa22.78■■□□□ 1.24
CLN6-222ENST00000637667 ADGRA3Q8IWK6 1321 aa22.78■■□□□ 1.24
CLN6-222ENST00000637667 COL1A2P08123 1366 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 TTC3P53804 2025 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 NEFLP07196 543 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 ATP4AP20648 1035 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 PAK2Q13177 524 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 SMAP1Q8IYB5 467 aaPredicted RBP22.77■■□□□ 1.24
CLN6-222ENST00000637667 TRIM22Q8IYM9 498 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 LENG9Q96B70 501 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 TM6SF1Q9BZW5 370 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 UBE2ZQ9H832 354 aaPredicted RBP22.77■■□□□ 1.24
CLN6-222ENST00000637667 PADI3Q9ULW8 664 aa22.77■■□□□ 1.24
CLN6-222ENST00000637667 MAFBQ9Y5Q3 323 aaPredicted RBP22.77■■□□□ 1.24
CLN6-222ENST00000637667 ZBTB42B2RXF5 422 aa22.76■■□□□ 1.23
CLN6-222ENST00000637667 CTNNB1P35222 781 aa22.76■■□□□ 1.23
CLN6-222ENST00000637667 NLRP5P59047 1200 aa22.76■■□□□ 1.23
CLN6-222ENST00000637667 TIGD5Q53EQ6 642 aa22.76■■□□□ 1.23
CLN6-222ENST00000637667 RTN4RL1Q86UN2 441 aaPredicted RBP22.76■■□□□ 1.23
CLN6-222ENST00000637667 CKAP2LQ8IYA6 745 aa22.76■■□□□ 1.23
CLN6-222ENST00000637667 KIAA0319LQ8IZA0 1049 aa22.76■■□□□ 1.23
CLN6-222ENST00000637667 PCDHA10Q9Y5I2 948 aa22.76■■□□□ 1.23
CLN6-222ENST00000637667 CPLX1O14810 134 aa22.75■■□□□ 1.23
CLN6-222ENST00000637667 RB1P06400 928 aa22.75■■□□□ 1.23
CLN6-222ENST00000637667 PSAPP07602 524 aa22.75■■□□□ 1.23
CLN6-222ENST00000637667 LINC00271P0C7V0 271 aa22.75■■□□□ 1.23
CLN6-222ENST00000637667 BMPR1AP36894 532 aa22.75■■□□□ 1.23
CLN6-222ENST00000637667 SSRP1Q08945 709 aaKnown RBP22.75■■□□□ 1.23
CLN6-222ENST00000637667 BBXQ8WY36 941 aaPredicted RBP22.75■■□□□ 1.23
CLN6-222ENST00000637667 ZNF689Q96CS4 500 aaPredicted RBP22.75■■□□□ 1.23
CLN6-222ENST00000637667 ZNF274Q96GC6 653 aaPredicted RBP22.75■■□□□ 1.23
CLN6-222ENST00000637667 LARP6Q9BRS8 491 aaKnown RBP22.75■■□□□ 1.23
CLN6-222ENST00000637667 UPF3BQ9BZI7 483 aaKnown RBP22.75■■□□□ 1.23
CLN6-222ENST00000637667 GINS2Q9Y248 185 aa22.75■■□□□ 1.23
CLN6-222ENST00000637667 RWDD3Q9Y3V2 267 aa22.75■■□□□ 1.23
CLN6-222ENST00000637667 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.74■■□□□ 1.23
CLN6-222ENST00000637667 C5orf67F2Z3F1 127 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms