RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ATN1P54259 1190 aaPredicted RBP21.94■■□□□ 1.1
CIRBP-220ENST00000588917 SNX17Q15036 470 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 IL17AQ16552 155 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 XKR3Q5GH77 459 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 FAM47CQ5HY64 1035 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 OTUD6AQ7L8S5 288 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 TPH2Q8IWU9 490 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 C4orf19Q8IY42 314 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 KRI1Q8N9T8 703 aaKnown RBP21.94■■□□□ 1.1
CIRBP-220ENST00000588917 DYDC2Q96IM9 177 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 GDF15Q99988 308 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 NRCAMQ92823 1304 aa21.94■■□□□ 1.1
CIRBP-220ENST00000588917 DCDC2CA8MYV0 355 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 GRIN2DO15399 1336 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 XRCC6P12956 609 aaKnown RBP eCLIP21.93■■□□□ 1.1
CIRBP-220ENST00000588917 NCLP19338 710 aaKnown RBP21.93■■□□□ 1.1
CIRBP-220ENST00000588917 MARK3P27448 753 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 MARCKSP29966 332 aaPredicted RBP21.93■■□□□ 1.1
CIRBP-220ENST00000588917 UBA7P41226 1012 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 PLCB4Q15147 1175 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 ZNF484Q5JVG2 852 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 ANKRD33Q7Z3H0 272 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 BANK1Q8NDB2 785 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 GTF2IRD1Q9UHL9 959 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 ZMYND8Q9ULU4 1186 aaPredicted RBP21.93■■□□□ 1.1
CIRBP-220ENST00000588917 IGSF9BQ9UPX0 1349 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 TRPC6Q9Y210 931 aa21.93■■□□□ 1.1
CIRBP-220ENST00000588917 C17orf102A2RUQ5 167 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 LYPLA2O95372 231 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 OATP04181 439 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 SMIM10L2AP0DMW4 78 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 SMIM10L2BP0DMW5 78 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 SPATA32Q96LK8 384 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 LXNQ9BS40 222 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 RGL1Q9NZL6 768 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 HDAC6Q9UBN7 1215 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 FBXO2Q9UK22 296 aaPredicted RBP21.92■■□□□ 1.1
CIRBP-220ENST00000588917 DOCK5Q9H7D0 1870 aa21.92■■□□□ 1.1
CIRBP-220ENST00000588917 COL1A2P08123 1366 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 LAMA3Q16787 3333 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 SOX1O00570 391 aaPredicted RBP21.91■■□□□ 1.1
CIRBP-220ENST00000588917 ATP4AP20648 1035 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 CCT6AP40227 531 aaKnown RBP21.91■■□□□ 1.1
CIRBP-220ENST00000588917 CYP4A11Q02928 519 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 PPFIA1Q13136 1202 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 CATSPER3Q86XQ3 398 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 EXOC8Q8IYI6 725 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 ZNF579Q8NAF0 562 aaKnown RBP21.91■■□□□ 1.1
CIRBP-220ENST00000588917 SNX29Q8TEQ0 813 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 NACC1Q96RE7 527 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 NIFKQ9BYG3 293 aaKnown RBP21.91■■□□□ 1.1
CIRBP-220ENST00000588917 NT5C3AQ9H0P0 336 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 PPME1Q9Y570 386 aa21.91■■□□□ 1.1
CIRBP-220ENST00000588917 DDX11L8A8MPP1 907 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 ZNF862O60290 1169 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 CUTAO60888 179 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 INSRRP14616 1297 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 TXLNAP40222 546 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 RTP1P59025 263 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 PRKCEQ02156 737 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 CTTNQ14247 550 aaKnown RBP21.9■■□□□ 1.1
CIRBP-220ENST00000588917 LRRC26Q2I0M4 334 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 CALML4Q96GE6 196 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 NOD1Q9Y239 953 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 ATP11BQ9Y2G3 1177 aa21.9■■□□□ 1.1
CIRBP-220ENST00000588917 KDM3AQ9Y4C1 1321 aa21.89■■□□□ 1.1
CIRBP-220ENST00000588917 SPATA31C1P0DKV0 1188 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 SYN1P17600 705 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 YWHABP31946 246 aaKnown RBP21.89■■□□□ 1.09
CIRBP-220ENST00000588917 ME1P48163 572 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 TLE2Q04725 743 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 GRIK4Q16099 956 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 UGCGQ16739 394 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 CDK5RAP3Q96JB5 506 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 CSRNP2Q9H175 543 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 ANKEF1Q9NU02 776 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 SETD4Q9NVD3 440 aa21.89■■□□□ 1.09
CIRBP-220ENST00000588917 PQBP1O60828 265 aaKnown RBP21.88■■□□□ 1.09
CIRBP-220ENST00000588917 MED24O75448 989 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 RPLP2P05387 115 aaKnown RBP21.88■■□□□ 1.09
CIRBP-220ENST00000588917 HOXC8P31273 242 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 PTGISQ16647 500 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 CSPP1Q1MSJ5 1256 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 TRIM60Q495X7 471 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 TRMT1LQ7Z2T5 733 aaKnown RBP21.88■■□□□ 1.09
CIRBP-220ENST00000588917 CABP7Q86V35 215 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 FAM126BQ8IXS8 530 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 LEO1Q8WVC0 666 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-220ENST00000588917 LRCH3Q96II8 777 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 CCSER1Q9C0I3 900 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 CCDC39Q9UFE4 941 aa21.88■■□□□ 1.09
CIRBP-220ENST00000588917 ALPK3Q96L96 1907 aa21.87■■□□□ 1.09
CIRBP-220ENST00000588917 MAGEB2O15479 319 aa21.87■■□□□ 1.09
CIRBP-220ENST00000588917 CD4P01730 458 aa21.87■■□□□ 1.09
CIRBP-220ENST00000588917 MAGEA10P43363 369 aaPredicted RBP21.87■■□□□ 1.09
CIRBP-220ENST00000588917 HYIQ5T013 277 aa21.87■■□□□ 1.09
CIRBP-220ENST00000588917 GDF6Q6KF10 455 aaPredicted RBP21.87■■□□□ 1.09
CIRBP-220ENST00000588917 CCDC43Q96MW1 224 aaKnown RBP21.87■■□□□ 1.09
CIRBP-220ENST00000588917 CLIC6Q96NY7 704 aa21.87■■□□□ 1.09
CIRBP-220ENST00000588917 JPH2Q9BR39 696 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms