RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 ME3Q16798 604 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 RUFY4Q6ZNE9 571 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 CCDC60Q8IWA6 550 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 USP38Q8NB14 1042 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 DNAJB3Q8WWF6 145 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 BBXQ8WY36 941 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 GTF3C6Q969F1 213 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 AIFM3Q96NN9 605 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 NAP1L4Q99733 375 aaKnown RBP14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 IFIH1Q9BYX4 1025 aaKnown RBP14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 PRDM12Q9H4Q4 367 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 ORC3Q9UBD5 711 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 MAFBQ9Y5Q3 323 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 UNC80Q8N2C7 3258 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 CHD7Q9P2D1 2997 aa14.88□□□□□ -0.03
HNRNPC-205ENST00000553300 CCDC194A0A1B0GVG4 234 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 SMIM35A0A1B0GVV1 85 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 MSH4O15457 936 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 EDIL3O43854 480 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 GAS7O60861 476 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 DEFB103AP81534 67 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 MRPS6P82932 125 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 MKRN4PQ13434 485 aaPredicted RBP14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 RDM1Q8NG50 284 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 SLC5A5Q92911 643 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 FAM167AQ96KS9 214 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 MBOAT7Q96N66 472 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 BRMS1Q9HCU9 246 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 KCNJ14Q9UNX9 436 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 CEP131Q9UPN4 1083 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 SAMM50Q9Y512 469 aa14.87□□□□□ -0.03
HNRNPC-205ENST00000553300 MICAL3Q7RTP6 2002 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 CTDNEP1O95476 244 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 GCFC2P16383 781 aaKnown RBP14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 JAK3P52333 1124 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 MGAT3Q09327 533 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 TCTN1Q2MV58 587 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 LRCH2Q5VUJ6 765 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 MTHFD1LQ6UB35 978 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 CKAP2LQ8IYA6 745 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 IL27Q8NEV9 243 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 TEKT3Q9BXF9 490 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 DISC1Q9NRI5 854 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 INSL6Q9Y581 213 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 PRUNE2Q8WUY3 3088 aa14.86□□□□□ -0.03
HNRNPC-205ENST00000553300 PSMD10O75832 226 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 KLRC1P26715 233 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 TAP1Q03518 808 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 FBXO47Q5MNV8 452 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 PPP4R3AQ6IN85 833 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 MYOCDQ8IZQ8 938 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 ZNF710Q8N1W2 664 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 NECAB1Q8N987 351 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 TOP1MTQ969P6 601 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 UIMC1Q96RL1 719 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 FTHL17Q9BXU8 183 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 FAM49AQ9H0Q0 323 aaPredicted RBP14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 NRBP2Q9NSY0 501 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 GABBR1Q9UBS5 961 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 DDX25Q9UHL0 483 aaKnown RBP14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 LIMCH1Q9UPQ0 1083 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 CDY2AQ9Y6F7 541 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 TRANK1O15050 2925 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 KDM3AQ9Y4C1 1321 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 MAGEB2O15479 319 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 GHRP10912 638 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 FDPSP14324 419 aaKnown RBP14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 POU3F3P20264 500 aaPredicted RBP14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 ATP4AP20648 1035 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 LPIN1Q14693 890 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 INF2Q27J81 1249 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 LETM2Q2VYF4 491 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 C8orf34Q49A92 452 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.85□□□□□ -0.034e-7■■■■□ 21.4
HNRNPC-205ENST00000553300 TSHZ1Q6ZSZ6 1077 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 NEK8Q86SG6 692 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 NSUN7Q8NE18 718 aaKnown RBP14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 TRAPPC12Q8WVT3 735 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 FAM20AQ96MK3 541 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 CELF4Q9BZC1 486 aaKnown RBP14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 TRPV2Q9Y5S1 764 aa14.85□□□□□ -0.03
HNRNPC-205ENST00000553300 PTPRSQ13332 1948 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 IGSF9BQ9UPX0 1349 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 TBX3O15119 743 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 TDP2O95551 362 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 IGFBP4P22692 258 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 KRT2P35908 639 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 HTRA4P83105 476 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 TRIM29Q14134 588 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 ODR4Q5SWX8 454 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 MIER3Q7Z3K6 550 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 ETNPPLQ8TBG4 499 aa14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 ZSCAN31Q96LW9 406 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-205ENST00000553300 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.83□□□□□ -0.04
HNRNPC-205ENST00000553300 ZBTB42B2RXF5 422 aa14.83□□□□□ -0.04
HNRNPC-205ENST00000553300 GTPBP6O43824 516 aaPredicted RBP14.83□□□□□ -0.04
HNRNPC-205ENST00000553300 LARGE1O95461 756 aa14.83□□□□□ -0.04
HNRNPC-205ENST00000553300 TMOD1P28289 359 aa14.83□□□□□ -0.04
HNRNPC-205ENST00000553300 ADGRE1Q14246 886 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms