RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HBP1O60381 514 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 EFCAB14O75071 495 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 MMP1P03956 469 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 SFNP31947 248 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 PBX2P40425 430 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 NR5A1Q13285 461 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 IL27Q8NEV9 243 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 ETNPPLQ8TBG4 499 aa19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 TTYH1Q9H313 450 aaPredicted RBP19.47■□□□□ 0.71
CHMP1A-208ENST00000550102 ABHD14A-ACY1A0A1B0GW23 586 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 CHMP2AO43633 222 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 SLC37A4O43826 429 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 PSMD10O75832 226 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 WDR5P61964 334 aaKnown RBP19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 HMGN5P82970 282 aaKnown RBP19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 FAM26DQ5JW98 314 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 KRT40Q6A162 431 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 PPP4R3AQ6IN85 833 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 DIS3L2Q8IYB7 885 aaKnown RBP19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 RDM1Q8NG50 284 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 PHOSPHO2Q8TCD6 241 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 TRAPPC12Q8WVT3 735 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 TNFRSF25Q93038 417 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 FAM167AQ96KS9 214 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 TBC1D32Q96NH3 1257 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 GUCD1Q96NT3 240 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 UNC45AQ9H3U1 944 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 DISC1Q9NRI5 854 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 PCDHA11Q9Y5I1 949 aa19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 MAFBQ9Y5Q3 323 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-208ENST00000550102 CHD7Q9P2D1 2997 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 IKBKEQ14164 716 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 DNAJB3Q8WWF6 145 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 BBXQ8WY36 941 aaPredicted RBP19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 GJA10Q969M2 543 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 FAM49AQ9H0Q0 323 aaPredicted RBP19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 GABBR1Q9UBS5 961 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 PCDHA2Q9Y5H9 948 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 ARID2Q68CP9 1835 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 TRANK1O15050 2925 aa19.45■□□□□ 0.7
CHMP1A-208ENST00000550102 FAM205CA6NFA0 338 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 CCNT1O60563 726 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 RABGGTBP53611 331 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 MRPS6P82932 125 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 SAFBQ15424 915 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 TCTN1Q2MV58 587 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 PLEKHG4Q58EX7 1191 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 EARS2Q5JPH6 523 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 ZNF484Q5JVG2 852 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 MIER3Q7Z3K6 550 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 HERC6Q8IVU3 1022 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 SEPT8Q92599 483 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 ZBTB10Q96DT7 871 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 C8orf76Q96K31 380 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 STXBP5LQ9Y2K9 1186 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 COL6A3P12111 3177 aa19.44■□□□□ 0.7
CHMP1A-208ENST00000550102 M0QZ92 97 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 CHRNA1P02708 482 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 ATP4AP20648 1035 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 PRKCEQ02156 737 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 MGAT3Q09327 533 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 MTHFD1LQ6UB35 978 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 DBF4BQ8NFT6 615 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 FAM20AQ96MK3 541 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 IFIH1Q9BYX4 1025 aaKnown RBP19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 NKX2-4Q9H2Z4 354 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 ZNF576Q9H609 170 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 KCNMB3Q9NPA1 279 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 YBX2Q9Y2T7 364 aaKnown RBP19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 CDY2AQ9Y6F7 541 aa19.43■□□□□ 0.7
CHMP1A-208ENST00000550102 SMIM35A0A1B0GVV1 85 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 ZBTB42B2RXF5 422 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 BTBD18B2RXH4 712 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 TBX3O15119 743 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 OATP04181 439 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 KLRC1P26715 233 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 DEFB103AP81534 67 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 UGCGQ16739 394 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 IER5Q5VY09 327 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 B3GNT9Q6UX72 402 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 FAM184AQ8NB25 1140 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 APBB2Q92870 758 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 SLC28A3Q9HAS3 691 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 CEP131Q9UPN4 1083 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 COL4A4P53420 1690 aaPredicted RBP19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 CDH23Q9H251 3354 aa19.42■□□□□ 0.7
CHMP1A-208ENST00000550102 ZNF862O60290 1169 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 GHRP10912 638 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 GUCY1B3Q02153 619 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 PPP2R5CQ13362 524 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 PPP2R2DQ66LE6 453 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 CDX2Q99626 313 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 VAV3Q9UKW4 847 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 TRPV2Q9Y5S1 764 aa19.41■□□□□ 0.7
CHMP1A-208ENST00000550102 KIF28PB7ZC32 967 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 MARCH6O60337 910 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 C22orf31O95567 290 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 AMHP03971 560 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms