RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TMEM266Q2M3C6 531 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 NAALADL2Q58DX5 795 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 SUGP1Q8IWZ8 645 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 IGDCC4Q8TDY8 1250 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 PCYT2Q99447 389 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 AZI2Q9H6S1 392 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 LY9Q9HBG7 655 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 JPH1Q9HDC5 661 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 LRFN2Q9ULH4 789 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 UBIAD1Q9Y5Z9 338 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 IGSF9BQ9UPX0 1349 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 SPDYE3A6NKU9 549 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 LOC730098B7Z3J9 87 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 RXRAP19793 462 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 SPOUT1Q5T280 376 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 TTC22Q5TAA0 569 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 MICAL1Q8TDZ2 1067 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 RUFY2Q8WXA3 655 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
SMARCA4-206ENST00000538456 PER2O15055 1255 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 RPLP2P05387 115 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 PTPN5P54829 565 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 ZXDAP98168 799 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 NFX1Q12986 1120 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 NFXL1Q6ZNB6 911 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 BMP8AQ7Z5Y6 402 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 MAP3K14Q99558 947 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 CELF4Q9BZC1 486 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 TMX1Q9H3N1 280 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 TLE6Q9H808 572 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 JADE2Q9NQC1 790 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 SLC9A2Q9UBY0 812 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 GINS2Q9Y248 185 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 SQORQ9Y6N5 450 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 CFAP54Q96N23 3096 aa16.04■□□□□ 0.16
SMARCA4-206ENST00000538456 EVPLQ92817 2033 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 CHMLP26374 656 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 PDE4AP27815 886 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 KRT76Q01546 638 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 PLCB4Q15147 1175 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 CCDC82Q8N4S0 544 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 LZTS2Q9BRK4 669 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 PHF7Q9BWX1 381 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 HCSTQ9UBK5 93 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 PCDHA6Q9UN73 950 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 PCDHA8Q9Y5H6 950 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 PCDHA2Q9Y5H9 948 aa16.03■□□□□ 0.16
SMARCA4-206ENST00000538456 CACNA1HO95180 2353 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 CCDC69A6NI79 296 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 TBKBP1A7MCY6 615 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 PRC1O43663 620 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 MGEA5O60502 916 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 SMARCA1P28370 1054 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 GNAQP50148 359 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 ACTR2P61160 394 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 TCF15Q12870 199 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 CBX2Q14781 532 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 HEATR3Q7Z4Q2 680 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 FBXL6Q8N531 539 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 VN1R2Q8NFZ6 395 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 SDF4Q9BRK5 362 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 TLR9Q9NR96 1032 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 KCNH7Q9NS40 1196 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 FAM86C1Q9NVL1 165 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 PCDHB7Q9Y5E2 793 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 PCDHB12Q9Y5F1 795 aa16.02■□□□□ 0.16
SMARCA4-206ENST00000538456 DENND3A2RUS2 1198 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 MAFGO15525 162 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 STAT5BP51692 787 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 MTHFD1LQ6UB35 978 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 CYP2W1Q8TAV3 490 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 TNPO1Q92973 898 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 PGBD1Q96JS3 809 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 PPP1R16BQ96T49 567 aa16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-206ENST00000538456 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 SMIM35A0A1B0GVV1 85 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
SMARCA4-206ENST00000538456 SGSM2O43147 1006 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 FGF18O76093 207 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 SP100P23497 879 aaPredicted RBP16■□□□□ 0.15
SMARCA4-206ENST00000538456 VCPP55072 806 aaKnown RBP16■□□□□ 0.15
SMARCA4-206ENST00000538456 ERVFC1P60507 584 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 SIGLEC14Q08ET2 396 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 COL9A3Q14050 684 aaPredicted RBP16■□□□□ 0.15
SMARCA4-206ENST00000538456 PKN1Q16512 942 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 FAM102BQ5T8I3 360 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 PLPPR4Q7Z2D5 763 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 TMEM40Q8WWA1 233 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 SNX27Q96L92 541 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 NEK1Q96PY6 1258 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 PRRX2Q99811 253 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms