RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 RGL1Q9NZL6 768 aa20.13■□□□□ 0.81
DDX55-204ENST00000536079 PCDHA12Q9UN75 941 aa20.13■□□□□ 0.81
DDX55-204ENST00000536079 POTEMA6NI47 508 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 OR52Z1P0C646 297 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 ACRP10323 421 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 SLC26A2P50443 739 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 PRKCEQ02156 737 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 PTGDRQ13258 359 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 EPHA7Q15375 998 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 C9orf50Q5SZB4 431 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 ZNF618Q5T7W0 954 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 DYDC2Q96IM9 177 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 SH2D3AQ9BRG2 576 aa20.12■□□□□ 0.81
DDX55-204ENST00000536079 STX6O43752 255 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 HBP1O60381 514 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 OATP04181 439 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 IQCF3P0C7M6 154 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 PDCP20941 246 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 BMP8BP34820 402 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 TECP42680 631 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 FPGSQ05932 587 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 RBL2Q08999 1139 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 PKP1Q13835 747 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 CTTNQ14247 550 aaKnown RBP20.11■□□□□ 0.81
DDX55-204ENST00000536079 MBTPS1Q14703 1052 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDX55-204ENST00000536079 UBE2OQ9C0C9 1292 aaKnown RBP20.11■□□□□ 0.81
DDX55-204ENST00000536079 TUBE1Q9UJT0 475 aa20.11■□□□□ 0.81
DDX55-204ENST00000536079 A0A087WWV3 80 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 ZBTB39O15060 712 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 GNAT1P11488 350 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 THPOP40225 353 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 ORC2Q13416 577 aaPredicted RBP20.1■□□□□ 0.81
DDX55-204ENST00000536079 BFSP2Q13515 415 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 TCTN1Q2MV58 587 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 RILPL1Q5EBL4 403 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 MTHFD1LQ6UB35 978 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 ZNF579Q8NAF0 562 aaKnown RBP20.1■□□□□ 0.81
DDX55-204ENST00000536079 CAGE1Q8TC20 777 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 BBXQ8WY36 941 aaPredicted RBP20.1■□□□□ 0.81
DDX55-204ENST00000536079 CEP89Q96ST8 783 aa20.1■□□□□ 0.81
DDX55-204ENST00000536079 EIF2AK1Q9BQI3 630 aaKnown RBP20.1■□□□□ 0.81
DDX55-204ENST00000536079 RRN3P2A6NIE6 340 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 PITPNM1O00562 1244 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 SLITRK3O94933 977 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 P4HBP07237 508 aaKnown RBP20.09■□□□□ 0.81
DDX55-204ENST00000536079 KLRC1P26715 233 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 PSMC5P62195 406 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 CYP4A11Q02928 519 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 SHHQ15465 462 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 ZNF484Q5JVG2 852 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 FOXD4L5Q5VV16 416 aaPredicted RBP20.09■□□□□ 0.81
DDX55-204ENST00000536079 PLA2G4FQ68DD2 849 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 LRRC8DQ7L1W4 858 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 TMEM199Q8N511 208 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 DNAJB3Q8WWF6 145 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 FOXD4L4Q8WXT5 416 aaPredicted RBP20.09■□□□□ 0.81
DDX55-204ENST00000536079 HSD17B14Q9BPX1 270 aa20.09■□□□□ 0.81
DDX55-204ENST00000536079 NBNO60934 754 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 C22orf31O95567 290 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.81
DDX55-204ENST00000536079 SELPP16109 830 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 QARSP47897 775 aaKnown RBP20.08■□□□□ 0.81
DDX55-204ENST00000536079 TARBP2Q15633 366 aaKnown RBP20.08■□□□□ 0.81
DDX55-204ENST00000536079 ANO5Q75V66 913 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 BRAPQ7Z569 592 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 DEFB128Q7Z7B8 93 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 RETREG2Q8NC44 543 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.817e-8■■■□□ 15.9
DDX55-204ENST00000536079 LXNQ9BS40 222 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 PCDHA2Q9Y5H9 948 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 CLIC4Q9Y696 253 aa20.08■□□□□ 0.81
DDX55-204ENST00000536079 WDR81Q562E7 1941 aa20.08■□□□□ 0.8
DDX55-204ENST00000536079 DDX11L8A8MPP1 907 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 MED24O75448 989 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 CHRNA1P02708 482 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 CTSHP09668 335 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 SPATA31C1P0DKV0 1188 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 NPEPPSP55786 919 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 ATP2C1P98194 919 aaPredicted RBP20.07■□□□□ 0.8
DDX55-204ENST00000536079 PPIGQ13427 754 aaKnown RBP eCLIP20.07■□□□□ 0.84e-6■■□□□ 12.5
DDX55-204ENST00000536079 TMEM240Q5SV17 173 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 TPH2Q8IWU9 490 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 FAM167AQ96KS9 214 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 NIFKQ9BYG3 293 aaKnown RBP20.07■□□□□ 0.8
DDX55-204ENST00000536079 FAM49AQ9H0Q0 323 aaPredicted RBP20.07■□□□□ 0.8
DDX55-204ENST00000536079 IL23AQ9NPF7 189 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 NRBP2Q9NSY0 501 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 SEPT9Q9UHD8 586 aaPredicted RBP20.07■□□□□ 0.8
DDX55-204ENST00000536079 SCN5AQ14524 2016 aa20.07■□□□□ 0.8
DDX55-204ENST00000536079 PP2D1A8MPX8 630 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 FXR2P51116 673 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDX55-204ENST00000536079 MGAT3Q09327 533 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 TMEM62Q0P6H9 643 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 ECM1Q16610 540 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 XKR3Q5GH77 459 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 ZNF365Q70YC5 407 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 KIAA0319LQ8IZA0 1049 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms