RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PLCB3Q01970 1234 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 PPFIA1Q13136 1202 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 IER5Q5VY09 327 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 COLGALT1Q8NBJ5 622 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 MRPS27Q92552 414 aaKnown RBP20.26■□□□□ 0.83
PVT1-220ENST00000524165 RUBCNQ92622 972 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 INPP4AQ96PE3 977 aaPredicted RBP20.26■□□□□ 0.83
PVT1-220ENST00000524165 TCF25Q9BQ70 676 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 RNF216Q9NWF9 866 aaPredicted RBP20.26■□□□□ 0.83
PVT1-220ENST00000524165 PUF60Q9UHX1 559 aaKnown RBP20.26■□□□□ 0.83
PVT1-220ENST00000524165 PADI3Q9ULW8 664 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 USTQ9Y2C2 406 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 SARSP49591 514 aaKnown RBP20.25■□□□□ 0.83
PVT1-220ENST00000524165 MARCH8Q5T0T0 291 aa20.25■□□□□ 0.83
PVT1-220ENST00000524165 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
PVT1-220ENST00000524165 HINFPQ9BQA5 517 aa20.25■□□□□ 0.83
PVT1-220ENST00000524165 VAT1LQ9HCJ6 419 aa20.25■□□□□ 0.83
PVT1-220ENST00000524165 ENTPD7Q9NQZ7 604 aa20.25■□□□□ 0.83
PVT1-220ENST00000524165 PCDHB7Q9Y5E2 793 aa20.25■□□□□ 0.83
PVT1-220ENST00000524165 ZMYM6O95789 1325 aa20.25■□□□□ 0.83
PVT1-220ENST00000524165 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 HIDE1A8MVS5 230 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 FIBPO43427 364 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 APOBRQ0VD83 1088 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 PAK2Q13177 524 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 SEMA3FQ13275 785 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 GRIK4Q16099 956 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 MIER1Q8N108 512 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 PI4K2BQ8TCG2 481 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 PCDHA1Q9Y5I3 950 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 CHD8Q9HCK8 2581 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 IGSF9BQ9UPX0 1349 aa20.24■□□□□ 0.83
PVT1-220ENST00000524165 ARP10275 920 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 LAG3P18627 525 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 MRPS9P82933 396 aaKnown RBP20.23■□□□□ 0.83
PVT1-220ENST00000524165 CCDC178Q5BJE1 867 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 SENP7Q9BQF6 1050 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 TYW1Q9NV66 732 aaKnown RBP20.23■□□□□ 0.83
PVT1-220ENST00000524165 TELO2Q9Y4R8 837 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 TRPV2Q9Y5S1 764 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 HCFC2Q9Y5Z7 792 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 R4GN57 208 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 USP24Q9UPU5 2620 aa20.23■□□□□ 0.83
PVT1-220ENST00000524165 TBKBP1A7MCY6 615 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 M0QZ92 97 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 PARP1P09874 1014 aaKnown RBP20.22■□□□□ 0.83
PVT1-220ENST00000524165 NT5C2P49902 561 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 ST3GAL2Q16842 350 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 RSPO4Q2I0M5 234 aaPredicted RBP20.22■□□□□ 0.83
PVT1-220ENST00000524165 KIAA1841Q6NSI8 718 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 ZC3H14Q6PJT7 736 aaKnown RBP20.22■□□□□ 0.83
PVT1-220ENST00000524165 ESR2Q92731 530 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 ZKSCAN3Q9BRR0 538 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 TMX1Q9H3N1 280 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 KAT14Q9H8E8 782 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 ERVK-5Q9HDB9 667 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 CYP26B1Q9NR63 512 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 ERAP1Q9NZ08 941 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 FRMPD4Q14CM0 1322 aa20.22■□□□□ 0.83
PVT1-220ENST00000524165 GCOM1H8Y6P7 765 aaPredicted RBP20.21■□□□□ 0.83
PVT1-220ENST00000524165 POLR2MP0CAP2 368 aa20.21■□□□□ 0.83
PVT1-220ENST00000524165 SDHBP21912 280 aa20.21■□□□□ 0.83
PVT1-220ENST00000524165 TCF7P36402 384 aaPredicted RBP20.21■□□□□ 0.83
PVT1-220ENST00000524165 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
PVT1-220ENST00000524165 RNF41Q9H4P4 317 aaPredicted RBP20.21■□□□□ 0.83
PVT1-220ENST00000524165 CWH43Q9H720 699 aa20.21■□□□□ 0.83
PVT1-220ENST00000524165 ZBTB5O15062 677 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 PPP1R11O60927 126 aaPredicted RBP20.2■□□□□ 0.82
PVT1-220ENST00000524165 EOMESO95936 686 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 HAND2P61296 217 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 SP4Q02446 784 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 TDGQ13569 410 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 ATAT1Q5SQI0 421 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 FCHSD1Q86WN1 690 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 SIX5Q8N196 739 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 GIMAP8Q8ND71 665 aaPredicted RBP20.2■□□□□ 0.82
PVT1-220ENST00000524165 DCTPP1Q9H773 170 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 HCSTQ9UBK5 93 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 DBR1Q9UK59 544 aaKnown RBP20.2■□□□□ 0.82
PVT1-220ENST00000524165 FBXL21Q9UKT6 434 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 DUSP12Q9UNI6 340 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 ATRXP46100 2492 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 KDM3AQ9Y4C1 1321 aa20.2■□□□□ 0.82
PVT1-220ENST00000524165 RRN3P2A6NIE6 340 aa20.19■□□□□ 0.82
PVT1-220ENST00000524165 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
PVT1-220ENST00000524165 TRAF1Q13077 416 aa20.19■□□□□ 0.82
PVT1-220ENST00000524165 FAM102BQ5T8I3 360 aa20.19■□□□□ 0.82
PVT1-220ENST00000524165 TMC7Q7Z402 723 aa20.19■□□□□ 0.82
PVT1-220ENST00000524165 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
PVT1-220ENST00000524165 CELF4Q9BZC1 486 aaKnown RBP20.19■□□□□ 0.82
PVT1-220ENST00000524165 FAM49AQ9H0Q0 323 aaPredicted RBP20.19■□□□□ 0.82
PVT1-220ENST00000524165 C1orf112Q9NSG2 853 aa20.19■□□□□ 0.82
PVT1-220ENST00000524165 WEE2P0C1S8 567 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 PPM1AP35813 382 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 KRT17Q04695 432 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 SLC24A5Q71RS6 500 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 TBC1D10CQ8IV04 446 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 DCLK2Q8N568 766 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 MRPL43Q8N983 215 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms