RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 SLC44A5Q8NCS7 719 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 XAGE3Q8WTP9 111 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 SLC7A3Q8WY07 619 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 ASIC4Q96FT7 647 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 TINF2Q9BSI4 451 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 PLVAPQ9BX97 442 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 ZNF341Q9BYN7 854 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 TGIF2Q9GZN2 237 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 NRSN2Q9GZP1 204 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 PORCNQ9H237 461 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 CYP8B1Q9UNU6 501 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 ADAMTS8Q9UP79 889 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 PCDHA11Q9Y5I1 949 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 CFAP46Q8IYW2 2715 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 H3BQ06 376 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-223ENST00000523636 PDGFBP01127 241 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-223ENST00000523636 ARP10275 920 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 CYBAP13498 195 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 BMP6P22004 513 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 ARNTP27540 789 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 CDC25BP30305 580 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 CD68P34810 354 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-223ENST00000523636 LIG3P49916 1009 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 RHBDL3P58872 404 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 GSTM4Q03013 218 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 TAP1Q03518 808 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 TRIM28Q13263 835 aaKnown RBP6.29□□□□□ -1.4
PABPC1-223ENST00000523636 MYBPC2Q14324 1141 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 SCN5AQ14524 2016 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 PKN1Q16512 942 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 PCNX4Q63HM2 1172 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 TTBK2Q6IQ55 1244 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 AGMOQ6ZNB7 445 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 ANKRD33Q7Z3H0 272 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 SULF2Q8IWU5 870 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 ADHFE1Q8IWW8 467 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 KIAA2013Q8IYS2 634 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 GALNT11Q8NCW6 608 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 SOCS4Q8WXH5 440 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 SCARF2Q96GP6 870 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-223ENST00000523636 TMEM74Q96NL1 305 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 TRIM56Q9BRZ2 755 aaKnown RBP6.29□□□□□ -1.4
PABPC1-223ENST00000523636 DDX41Q9UJV9 622 aaKnown RBP6.29□□□□□ -1.4
PABPC1-223ENST00000523636 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 ZHX2Q9Y6X8 837 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 TET1Q8NFU7 2136 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 DOCK2Q92608 1830 aa6.29□□□□□ -1.4
PABPC1-223ENST00000523636 MYBBP1AQ9BQG0 1328 aaKnown RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 RALGAPA2Q2PPJ7 1873 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 PAGE1O75459 146 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 IL1R1P14778 569 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 CYP2C19P33261 490 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 CRKP46108 304 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 TNNI2P48788 182 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 HNRNPUQ00839 825 aaKnown RBP eCLIP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 ZNF252P-AS1Q0IIN9 211 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 AIMP1Q12904 312 aaKnown RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 PPIGQ13427 754 aaKnown RBP eCLIP6.28□□□□□ -1.41e-6■□□□□ 8.6
PABPC1-223ENST00000523636 TAF7Q15545 349 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 PRRT3Q5FWE3 981 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 EPHA10Q5JZY3 1008 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 HP1BP3Q5SSJ5 553 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 HGSNATQ68CP4 663 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 PSRC1Q6PGN9 363 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 OTOP2Q7RTS6 562 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 C11orf96Q7Z7L8 435 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 PDZD3Q86UT5 571 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 FAM83AQ86UY5 434 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 JAZF1Q86VZ6 243 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 ANKRD18AQ8IVF6 992 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 SUGP1Q8IWZ8 645 aaKnown RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 ZNF654Q8IZM8 581 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 PHC3Q8NDX5 983 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 ARNTL2Q8WYA1 636 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 JARID2Q92833 1246 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 NKD2Q969F2 451 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 KLHDC7BQ96G42 594 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 APBA2Q99767 749 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 IRF2BPLQ9H1B7 796 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 KRT82Q9NSB4 513 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 GNL3LQ9NVN8 582 aaKnown RBP6.28□□□□□ -1.4
PABPC1-223ENST00000523636 KBTBD4Q9NVX7 518 aa6.28□□□□□ -1.4
PABPC1-223ENST00000523636 SIP14410 1827 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 FANCMQ8IYD8 2048 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 KBTBD13C9JR72 458 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 MSCO60682 206 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 GSTP1P09211 210 aaKnown RBP6.27□□□□□ -1.41
PABPC1-223ENST00000523636 GTF2F1P35269 517 aaKnown RBP eCLIP6.27□□□□□ -1.41
PABPC1-223ENST00000523636 TBX4P57082 545 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 ZXDAP98168 799 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 LMNB2Q03252 620 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 POU4F3Q15319 338 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 FAM47AQ5JRC9 791 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 WDR78Q5VTH9 848 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 GPR142Q7Z601 462 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 MORC1Q86VD1 984 aa6.27□□□□□ -1.41
PABPC1-223ENST00000523636 CCAR1Q8IX12 1150 aaKnown RBP6.27□□□□□ -1.41
PABPC1-223ENST00000523636 NPLOC4Q8TAT6 608 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms