RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 SAMD3Q8N6K7 520 aa10.63□□□□□ -0.71
PTPN20-216ENST00000506080 ZNF689Q96CS4 500 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-216ENST00000506080 PIGSQ96S52 555 aa10.63□□□□□ -0.71
PTPN20-216ENST00000506080 LNPKQ9C0E8 428 aa10.63□□□□□ -0.71
PTPN20-216ENST00000506080 ZNF215Q9UL58 517 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-216ENST00000506080 PLAGL2Q9UPG8 496 aa10.63□□□□□ -0.71
PTPN20-216ENST00000506080 DOCK5Q9H7D0 1870 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-216ENST00000506080 SPATA31C2B4DYI2 1134 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 DNAJB1P25685 340 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 ICAM3P32942 547 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 NT5C2P49902 561 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
PTPN20-216ENST00000506080 MGAT3Q09327 533 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 LPIN1Q14693 890 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 IMMTQ16891 758 aaKnown RBP10.62□□□□□ -0.71
PTPN20-216ENST00000506080 PAN2Q504Q3 1202 aaKnown RBP10.62□□□□□ -0.71
PTPN20-216ENST00000506080 BMP8AQ7Z5Y6 402 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
PTPN20-216ENST00000506080 PIBF1Q8WXW3 757 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 MSLNLQ96KJ4 702 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 INPP4AQ96PE3 977 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-216ENST00000506080 KRT23Q9C075 422 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 EHMT1Q9H9B1 1298 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 MRPL42Q9Y6G3 142 aaKnown RBP10.62□□□□□ -0.71
PTPN20-216ENST00000506080 LAMA4Q16363 1823 aa10.62□□□□□ -0.71
PTPN20-216ENST00000506080 FIBPO43427 364 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 RNF40O75150 1001 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 DGKIO75912 1065 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 EYA4O95677 639 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 ITGB1P05556 798 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 MARK3P27448 753 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 NRIP1P48552 1158 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 ZXDAP98168 799 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 TCF15Q12870 199 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 SEC23AQ15436 765 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
PTPN20-216ENST00000506080 SPPL3Q8TCT6 385 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 DNAJB3Q8WWF6 145 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 LINC01599Q8WXQ3 324 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 PPP2R3CQ969Q6 453 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 PLVAPQ9BX97 442 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 DIAPH3Q9NSV4 1193 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 FAM86C1Q9NVL1 165 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 CLEC1BQ9P126 229 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 BARX2Q9UMQ3 279 aaPredicted RBP10.61□□□□□ -0.71
PTPN20-216ENST00000506080 CDY2AQ9Y6F7 541 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 NRCAMQ92823 1304 aa10.61□□□□□ -0.71
PTPN20-216ENST00000506080 TRIOO75962 3097 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 LOC730098B7Z3J9 87 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 CYTH3O43739 400 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 IBSPP21815 317 aaPredicted RBP10.6□□□□□ -0.71
PTPN20-216ENST00000506080 CD52P31358 61 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 TCF7P36402 384 aaPredicted RBP10.6□□□□□ -0.71
PTPN20-216ENST00000506080 PPFIA1Q13136 1202 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 FBXO47Q5MNV8 452 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 TAF2Q6P1X5 1199 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 RSPH3Q86UC2 560 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 EFHBQ8N7U6 833 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 KLHL23Q8NBE8 558 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 SMRP1Q8NCR6 262 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 POF1BQ8WVV4 589 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 P2RX5Q93086 422 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 ZBTB10Q96DT7 871 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 DSCC1Q9BVC3 393 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 RIOX1Q9H6W3 641 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 CNNM2Q9H8M5 875 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 AGO3Q9H9G7 860 aaKnown RBP10.6□□□□□ -0.71
PTPN20-216ENST00000506080 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 FRMPD4Q14CM0 1322 aa10.6□□□□□ -0.71
PTPN20-216ENST00000506080 PNMA6FA0A0J9YX94 578 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 STAM2O75886 525 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 GLP2RO95838 553 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 IGBP1P78318 339 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 TRAF1Q13077 416 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 GRM4Q14833 912 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 GRIK4Q16099 956 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 TSHZ1Q6ZSZ6 1077 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 RTN4RL1Q86UN2 441 aaPredicted RBP10.59□□□□□ -0.71
PTPN20-216ENST00000506080 CMTR2Q8IYT2 770 aaKnown RBP10.59□□□□□ -0.71
PTPN20-216ENST00000506080 FBXL6Q8N531 539 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 RPGRIP1Q96KN7 1286 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 PRRX2Q99811 253 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 FAM49AQ9H0Q0 323 aaPredicted RBP10.59□□□□□ -0.71
PTPN20-216ENST00000506080 TUBE1Q9UJT0 475 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 USP15Q9Y4E8 981 aaPredicted RBP10.59□□□□□ -0.71
PTPN20-216ENST00000506080 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
PTPN20-216ENST00000506080 TTC3P53804 2025 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 KAT6AQ92794 2004 aa10.59□□□□□ -0.71
PTPN20-216ENST00000506080 GFRA3O60609 400 aa10.58□□□□□ -0.72
PTPN20-216ENST00000506080 GATMP50440 423 aa10.58□□□□□ -0.72
PTPN20-216ENST00000506080 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
PTPN20-216ENST00000506080 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
PTPN20-216ENST00000506080 COASYQ13057 564 aa10.58□□□□□ -0.72
PTPN20-216ENST00000506080 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-216ENST00000506080 PKN1Q16512 942 aa10.58□□□□□ -0.72
PTPN20-216ENST00000506080 NAALADL2Q58DX5 795 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms