RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 TRIM55Q9BYV6 548 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 FOXN1O15353 648 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 FBLP22087 321 aaKnown RBP4.95□□□□□ -1.62
PHC3-216ENST00000497171 FSTL1Q12841 308 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 FOXL1Q12952 345 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 TMPRSS6Q8IU80 811 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 UHMK1Q8TAS1 419 aaKnown RBP4.95□□□□□ -1.62
PHC3-216ENST00000497171 HNRNPLLQ8WVV9 542 aaKnown RBP4.95□□□□□ -1.62
PHC3-216ENST00000497171 KCTD13Q8WZ19 329 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 ARMC5Q96C12 935 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 GPR27Q9NS67 375 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 ARHGAP28Q9P2N2 729 aa4.95□□□□□ -1.62
PHC3-216ENST00000497171 CCDC85CA6NKD9 419 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 AGRPO00253 132 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 SMAD7O15105 426 aaKnown RBP4.94□□□□□ -1.62
PHC3-216ENST00000497171 RHOBTB3O94955 611 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 IL18BPO95998 194 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 DUSP8Q13202 625 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 GRM7Q14831 915 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 NOLC1Q14978 699 aaKnown RBP eCLIP4.94□□□□□ -1.62
PHC3-216ENST00000497171 SOGA3Q5TF21 947 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 LAIR1Q6GTX8 287 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 PCSK4Q6UW60 755 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 ZNF662Q6ZS27 426 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 RBM12BQ8IXT5 1001 aaKnown RBP4.94□□□□□ -1.62
PHC3-216ENST00000497171 WDR48Q8TAF3 677 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 SLC2A4RGQ9NR83 387 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 CEP72Q9P209 647 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 DSEQ9UL01 958 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 SHROOM4Q9ULL8 1493 aa4.94□□□□□ -1.62
PHC3-216ENST00000497171 LOC105371045A0A1W2PR82 267 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 NUDT3O95989 172 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 LTFP02788 710 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 GRK2P25098 689 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 GRK3P35626 688 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 IL12RB1P42701 662 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 MEOX1P50221 254 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 RBL2Q08999 1139 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 SF1Q15637 639 aaKnown RBP4.93□□□□□ -1.62
PHC3-216ENST00000497171 KIZQ2M2Z5 673 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 CCDC144BQ3MJ40 725 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 TNNI3KQ59H18 835 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 LARP1BQ659C4 914 aaKnown RBP4.93□□□□□ -1.62
PHC3-216ENST00000497171 USP30Q70CQ3 517 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 KCTD1Q719H9 257 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 FAM169BQ8N8A8 192 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 ZDHHC5Q9C0B5 715 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 PDGFDQ9GZP0 370 aaPredicted RBP4.93□□□□□ -1.62
PHC3-216ENST00000497171 ZSWIM4Q9H7M6 989 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 ST7Q9NRC1 585 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 ACTR10Q9NZ32 417 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 PRKAG3Q9UGI9 489 aa4.93□□□□□ -1.62
PHC3-216ENST00000497171 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 MATN2O00339 956 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 PTGS2P35354 604 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 KCNQ1P51787 676 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 MAP4K2Q12851 820 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 BMS1Q14692 1282 aaKnown RBP4.92□□□□□ -1.62
PHC3-216ENST00000497171 SLC35F1Q5T1Q4 408 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 RSPO2Q6UXX9 243 aaPredicted RBP4.92□□□□□ -1.62
PHC3-216ENST00000497171 RTKN2Q8IZC4 609 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 ANKRD35Q8N283 1001 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 OSBPL2Q9H1P3 480 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 CDIP1Q9H305 208 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 SLC39A2Q9NP94 309 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 PTGFRNQ9P2B2 879 aa4.92□□□□□ -1.62
PHC3-216ENST00000497171 SUSD5O60279 629 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 COL6A2P12110 1019 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 DENND5AQ6IQ26 1287 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 C6orf15Q6UXA7 325 aaPredicted RBP4.91□□□□□ -1.62
PHC3-216ENST00000497171 CXXC5Q7LFL8 322 aaKnown RBP4.91□□□□□ -1.62
PHC3-216ENST00000497171 OTOP2Q7RTS6 562 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 C1orf159Q96HA4 380 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 SRPK1Q96SB4 655 aaKnown RBP4.91□□□□□ -1.62
PHC3-216ENST00000497171 MPHOSPH9Q99550 1183 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 KCNJ15Q99712 375 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 PHF20Q9BVI0 1012 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 KIAA1683Q9H0B3 1180 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 OR10A2Q9H208 303 aa4.91□□□□□ -1.62
PHC3-216ENST00000497171 DDAH1O94760 285 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 GCP02774 474 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 KRT4P19013 534 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 EPHA5P54756 1037 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 DBPQ10586 325 aaPredicted RBP4.9□□□□□ -1.63
PHC3-216ENST00000497171 CNGB1Q14028 1251 aaPredicted RBP4.9□□□□□ -1.63
PHC3-216ENST00000497171 RAB33AQ14088 237 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 RRP1BQ14684 758 aaKnown RBP4.9□□□□□ -1.63
PHC3-216ENST00000497171 EP400NLQ6ZTU2 488 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 USP53Q70EK8 1073 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 FAM178BQ8IXR5 827 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 SHCBP1Q8NEM2 672 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 TMEM176AQ96HP8 235 aa4.9□□□□□ -1.63
PHC3-216ENST00000497171 KLF4O43474 513 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 SLC26A4O43511 780 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 PDE6AP16499 860 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 ADCY8P40145 1251 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 FXNQ16595 210 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 CELF2-AS1Q8N7Q2 184 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 CFHR4Q92496 578 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms