RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CDC27P30260 824 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 ZNF76P36508 570 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 BTG3Q14201 252 aaPredicted RBP26.48■■□□□ 1.83
COL27A1-208ENST00000494780 POTEBQ6S5H4 581 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 NME8Q8N427 588 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 TRAPPC12Q8WVT3 735 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 KHSRPQ92945 711 aaKnown RBP eCLIP26.48■■□□□ 1.83
COL27A1-208ENST00000494780 IGKV6D-21A0A0A0MT36 114 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 GRXCR2A6NFK2 248 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 NCK2O43639 380 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 IL9P15248 144 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 TMEM31Q5JXX7 168 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 GJD3Q8N144 294 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 LINC01599Q8WXQ3 324 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 LRFN3Q9BTN0 628 aa26.47■■□□□ 1.83
COL27A1-208ENST00000494780 CELF4Q9BZC1 486 aaKnown RBP26.47■■□□□ 1.83
COL27A1-208ENST00000494780 IGSF9BQ9UPX0 1349 aa26.46■■□□□ 1.83
COL27A1-208ENST00000494780 KDM3AQ9Y4C1 1321 aa26.46■■□□□ 1.83
COL27A1-208ENST00000494780 CCDC196A0A1B0GTZ2 297 aa26.46■■□□□ 1.83
COL27A1-208ENST00000494780 TMEM62Q0P6H9 643 aa26.46■■□□□ 1.83
COL27A1-208ENST00000494780 MTHFD1LQ6UB35 978 aa26.46■■□□□ 1.83
COL27A1-208ENST00000494780 RTN4RL1Q86UN2 441 aaPredicted RBP26.46■■□□□ 1.83
COL27A1-208ENST00000494780 PLVAPQ9BX97 442 aa26.46■■□□□ 1.83
COL27A1-208ENST00000494780 PADI3Q9ULW8 664 aa26.46■■□□□ 1.83
COL27A1-208ENST00000494780 PI4K2BG5E9Z4 385 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 H3BQ06 376 aaPredicted RBP26.45■■□□□ 1.82
COL27A1-208ENST00000494780 GRM6O15303 877 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 CCNE2O96020 404 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 FGD1P98174 961 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 PAK2Q13177 524 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 PFKFB3Q16875 520 aaPredicted RBP26.45■■□□□ 1.82
COL27A1-208ENST00000494780 FAM160B1Q5W0V3 765 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 ABHD15Q6UXT9 468 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 FAM43BQ6ZT52 329 aaPredicted RBP26.45■■□□□ 1.82
COL27A1-208ENST00000494780 PLA2G4DQ86XP0 818 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 NPAS4Q8IUM7 802 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 CRIPAKQ8N1N5 446 aa26.45■■□□□ 1.82
COL27A1-208ENST00000494780 NAP1L2Q9ULW6 460 aaPredicted RBP26.45■■□□□ 1.82
COL27A1-208ENST00000494780 BACH1O14867 736 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 HBP1O60381 514 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 GPR37L1O60883 481 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 CYP3A4P08684 503 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 STAG3L1P0CL83 205 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 SCG2P13521 617 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 ADD1P35611 737 aaKnown RBP26.44■■□□□ 1.82
COL27A1-208ENST00000494780 METAP2P50579 478 aaKnown RBP eCLIP26.44■■□□□ 1.82
COL27A1-208ENST00000494780 KRT76Q01546 638 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 JAKMIP3Q5VZ66 844 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 MCTP2Q6DN12 878 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 EP400NLQ6ZTU2 488 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 CMTR2Q8IYT2 770 aaKnown RBP26.44■■□□□ 1.82
COL27A1-208ENST00000494780 ATP8B4Q8TF62 1192 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 FAM50BQ9Y247 325 aa26.44■■□□□ 1.82
COL27A1-208ENST00000494780 ESYT2A0FGR8 921 aa26.43■■□□□ 1.82
COL27A1-208ENST00000494780 FAM86B1E9PN63 330 aa26.43■■□□□ 1.82
COL27A1-208ENST00000494780 DDX39AO00148 427 aaKnown RBP26.43■■□□□ 1.82
COL27A1-208ENST00000494780 FAM86B2P0C5J1 330 aa26.43■■□□□ 1.82
COL27A1-208ENST00000494780 CRYGNQ8WXF5 182 aa26.43■■□□□ 1.82
COL27A1-208ENST00000494780 KCNB2Q92953 911 aa26.43■■□□□ 1.82
COL27A1-208ENST00000494780 CLDND1Q9NY35 253 aa26.43■■□□□ 1.82
COL27A1-208ENST00000494780 COL1A2P08123 1366 aa26.43■■□□□ 1.82
COL27A1-208ENST00000494780 IGLV3-22A0A075B6J6 115 aa26.42■■□□□ 1.82
COL27A1-208ENST00000494780 DHX15O43143 795 aaKnown RBP26.42■■□□□ 1.82
COL27A1-208ENST00000494780 KLRC1P26715 233 aa26.42■■□□□ 1.82
COL27A1-208ENST00000494780 SSTR3P32745 418 aaPredicted RBP26.42■■□□□ 1.82
COL27A1-208ENST00000494780 MIS18BP1Q6P0N0 1132 aa26.42■■□□□ 1.82
COL27A1-208ENST00000494780 CCDC60Q8IWA6 550 aaPredicted RBP26.42■■□□□ 1.82
COL27A1-208ENST00000494780 P2RX5Q93086 422 aa26.42■■□□□ 1.82
COL27A1-208ENST00000494780 ZMYND12Q9H0C1 365 aa26.42■■□□□ 1.82
COL27A1-208ENST00000494780 ZNF302Q9NR11 478 aa26.42■■□□□ 1.82
COL27A1-208ENST00000494780 IPO5O00410 1097 aaKnown RBP26.41■■□□□ 1.82
COL27A1-208ENST00000494780 MMP1P03956 469 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 APOBRQ0VD83 1088 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 NAALADL2Q58DX5 795 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 ZNF484Q5JVG2 852 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 PDXDC2PQ6P474 469 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 CCDC12Q8WUD4 166 aaPredicted RBP26.41■■□□□ 1.82
COL27A1-208ENST00000494780 C6orf50Q9HD87 102 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 C11orf16Q9NQ32 467 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 MRPL42Q9Y6G3 142 aaKnown RBP26.41■■□□□ 1.82
COL27A1-208ENST00000494780 MYO7AQ13402 2215 aa26.41■■□□□ 1.82
COL27A1-208ENST00000494780 PLA2G5P39877 138 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 CTC1Q2NKJ3 1217 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 Q6ZUG5 572 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 TMX1Q9H3N1 280 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 TBC1D22BQ9NU19 505 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 PRKAG3Q9UGI9 489 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 PLAGL2Q9UPG8 496 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 ARIH1Q9Y4X5 557 aaPredicted RBP26.4■■□□□ 1.82
COL27A1-208ENST00000494780 NID2Q14112 1375 aa26.4■■□□□ 1.82
COL27A1-208ENST00000494780 ATG2AQ2TAZ0 1938 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 PRPF3O43395 683 aaKnown RBP26.39■■□□□ 1.82
COL27A1-208ENST00000494780 CPA1P15085 419 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 LTBRP36941 435 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 SETQ01105 290 aaPredicted RBP26.39■■□□□ 1.82
COL27A1-208ENST00000494780 HYAL1Q12794 435 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 SWSAP1Q6NVH7 229 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 KIAA0319LQ8IZA0 1049 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 REXO1Q8N1G1 1221 aaKnown RBP26.39■■□□□ 1.82
COL27A1-208ENST00000494780 BRF1Q92994 677 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms