RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 DNAJA1P31689 397 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 CLCN5P51795 746 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 SMTNP53814 917 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 WDR5P61964 334 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 CREMQ03060 361 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 KLRC3Q07444 240 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 GRB10Q13322 594 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 IKBKEQ14164 716 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ADGRE1Q14246 886 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 DGKDQ16760 1214 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 CCDC144BQ3MJ40 725 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ZMYM1Q5SVZ6 1142 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 SNRNP48Q6IEG0 339 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 Q7L0L9 218 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 LRRC8DQ7L1W4 858 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ADGRA1Q86SQ6 560 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ALDH16A1Q8IZ83 802 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF689Q96CS4 500 aaPredicted RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 DDX11Q96FC9 970 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 HSH2DQ96JZ2 352 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 AAASQ9NRG9 546 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 DPP7Q9UHL4 492 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 SSX2IPQ9Y2D8 614 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 GRIN2DO15399 1336 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 NFASCO94856 1347 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF532Q9HCE3 1301 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 OPLAHO14841 1288 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 EPB41L2O43491 1005 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 B4GALT4O60513 344 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 STAG3L1P0CL83 205 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 AKR1B1P15121 316 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 SYN1P17600 705 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 CASTP20810 708 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 VARSP26640 1264 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 PPM1AP35813 382 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 TIMM10P62072 90 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ADAM17P78536 824 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 FANCCQ00597 558 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 SIGLEC14Q08ET2 396 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 PSMD2Q13200 908 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 DSC3Q14574 896 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 PPP2R5BQ15173 497 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 MEI1Q5TIA1 1274 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 SYDE2Q5VT97 1194 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 C1orf228Q6PIY5 440 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 SREK1Q8WXA9 508 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 PIK3R5Q8WYR1 880 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 MSLNLQ96KJ4 702 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 RBCK1Q9BYM8 510 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 EHMT1Q9H9B1 1298 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 CAPN10Q9HC96 672 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 A1CFQ9NQ94 594 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 ECHDC1Q9NTX5 307 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 RNF146Q9NTX7 359 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 MCM9Q9NXL9 1143 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 PALD1Q9ULE6 856 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 MBLAC1A4D2B0 266 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 TMEM8BA6NDV4 472 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 BACH1O14867 736 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 SORBS3O60504 671 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CD2BP2O95400 341 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 MMP3P08254 477 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CTSHP09668 335 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 SMPD1P17405 629 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PAX3P23760 479 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 MTHFRP42898 656 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ZXDAP98168 799 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PLCB3Q01970 1234 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 NHLH1Q02575 133 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 MGAT3Q09327 533 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ADAM15Q13444 863 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 SLFN13Q68D06 897 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 RSPH3Q86UC2 560 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PPFIBP1Q86W92 1011 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 EXOC8Q8IYI6 725 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF444Q8N0Y2 327 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CYP4X1Q8N118 509 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 GJD3Q8N144 294 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CRIPAKQ8N1N5 446 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 OR6J1Q8NGC5 347 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 NSUN6Q8TEA1 469 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CLEC4DQ8WXI8 215 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 EAF2Q96CJ1 260 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 DRC1Q96MC2 740 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 RTP3Q9BQQ7 232 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 FAM126AQ9BYI3 521 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PHACTR1Q9C0D0 580 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CNNM2Q9H8M5 875 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 C11orf16Q9NQ32 467 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ZBTB40Q9NUA8 1239 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CD207Q9UJ71 328 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 FOXD3Q9UJU5 478 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 SALL3Q9BXA9 1300 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 GSG1L2A8MUP6 293 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PRR5-ARHGAP8B1AHC4 643 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 EML1O00423 815 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PAPSS2O95340 614 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ADH1CP00326 375 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 IFIT2P09913 472 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms