RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ATP4AP20648 1035 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 DEFB103AP81534 67 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 TMEM62Q0P6H9 643 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 NR5A1Q13285 461 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 IKBKEQ14164 716 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 EARS2Q5JPH6 523 aaKnown RBP9.36□□□□□ -0.91
HDAC6-221ENST00000477561 LRCH2Q5VUJ6 765 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 ZNF746Q6NUN9 644 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-221ENST00000477561 FAM117BQ6P1L5 589 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC6-221ENST00000477561 PIK3AP1Q6ZUJ8 805 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 KRT25Q7Z3Z0 450 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 CCDC83Q8IWF9 413 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 TET1Q8NFU7 2136 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 WASF1Q92558 559 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 SLC5A5Q92911 643 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 SLC9A7Q96T83 725 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 UNC45AQ9H3U1 944 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 PRDM12Q9H4Q4 367 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 CERS4Q9HA82 394 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 SLC28A3Q9HAS3 691 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 GABBR1Q9UBS5 961 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 LIMCH1Q9UPQ0 1083 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 PCDHA11Q9Y5I1 949 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 COL6A3P12111 3177 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 TMEM265A0A087WTH1 108 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 CYP3A7-CYP3A51PA0A087WV96 503 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 MBLAC1A4D2B0 266 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-221ENST00000477561 SLC37A4O43826 429 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 CA3P07451 260 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 PSAPP07602 524 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 GHRP10912 638 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 CYP3A7P24462 503 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 KLRC1P26715 233 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 KRT2P35908 639 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 KRT76Q01546 638 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 GUCY1B3Q02153 619 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 Q4G0T1 1027 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 PLEKHG4Q58EX7 1191 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 FAM26DQ5JW98 314 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 TAF2Q6P1X5 1199 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 MTHFD1LQ6UB35 978 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 RSPH3Q86UC2 560 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 SMAP1Q8IYB5 467 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-221ENST00000477561 PHOSPHO2Q8TCD6 241 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 ATP8B4Q8TF62 1192 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 TNPO1Q92973 898 aaKnown RBP9.35□□□□□ -0.91
HDAC6-221ENST00000477561 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 TEKT3Q9BXF9 490 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 DISC1Q9NRI5 854 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 DDX25Q9UHL0 483 aaKnown RBP9.35□□□□□ -0.91
HDAC6-221ENST00000477561 PCDHA10Q9Y5I2 948 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-221ENST00000477561 CDY2AQ9Y6F7 541 aa9.35□□□□□ -0.91
HDAC6-221ENST00000477561 ABHD14A-ACY1A0A1B0GW23 586 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 LCHNA4D1U4 455 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 WDR64B1ANS9 1081 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 BTBD18B2RXH4 712 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 K7ELQ4 463 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-221ENST00000477561 RFXAPO00287 272 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 TLL1O43897 1013 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 HBP1O60381 514 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 CCNT1O60563 726 aaKnown RBP9.34□□□□□ -0.91
HDAC6-221ENST00000477561 CAND2O75155 1236 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 PSMD10O75832 226 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 ARHGEF15O94989 841 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 UPP2O95045 317 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 FOSL2P15408 326 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 SLC26A2P50443 739 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 MRPS6P82932 125 aaKnown RBP9.34□□□□□ -0.91
HDAC6-221ENST00000477561 MGAT3Q09327 533 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 LPIN1Q14693 890 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 UGCGQ16739 394 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 KRT40Q6A162 431 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 MIER3Q7Z3K6 550 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 SPRED2Q7Z698 418 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 NEK8Q86SG6 692 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 RPAINQ86UA6 219 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 MYOCDQ8IZQ8 938 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 FAM177A1Q8N128 213 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-221ENST00000477561 SEPT8Q92599 483 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 MBOAT7Q96N66 472 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 PPP1R16BQ96T49 567 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 RIT2Q99578 217 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 PCDHA2Q9Y5H9 948 aa9.34□□□□□ -0.91
HDAC6-221ENST00000477561 CHD9Q3L8U1 2897 aa9.34□□□□□ -0.92
HDAC6-221ENST00000477561 SMIM35A0A1B0GVV1 85 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 ZBTB42B2RXF5 422 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 ZNF862O60290 1169 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 MARCH6O60337 910 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 MMP1P03956 469 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
HDAC6-221ENST00000477561 IGFBP4P22692 258 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 TRIM29Q14134 588 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 ZNF484Q5JVG2 852 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 FBXO47Q5MNV8 452 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms