RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CPSF6Q16630 551 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 CT47A1Q5JQC4 288 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 PAOXQ6QHF9 649 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 KRBA2Q6ZNG9 492 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 C11orf57Q6ZUT1 292 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 ZNF444Q8N0Y2 327 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 STK11IPQ8N1F8 1099 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 MLKLQ8NB16 471 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 CCDC112Q8NEF3 446 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 MYRIPQ8NFW9 859 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 CCDC12Q8WUD4 166 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 FBLIM1Q8WUP2 373 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 SDR42E1Q8WUS8 393 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 CELF1Q92879 486 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 SMARCE1Q969G3 411 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 NSUN4Q96CB9 384 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 LZTS2Q9BRK4 669 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 RIOK1Q9BRS2 568 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 MKNK2Q9HBH9 465 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 MCM9Q9NXL9 1143 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 PAXBP1Q9Y5B6 917 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 NHSQ6T4R5 1651 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 WDR64B1ANS9 1081 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 BTBD18B2RXH4 712 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 SNAP23O00161 211 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 FGRP09769 529 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 SPINK2P20155 84 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 CDK11BP21127 795 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 MAPK1P28482 360 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 NLRP5P59047 1200 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 POSTNQ15063 836 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 PTPAQ15257 358 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 SEC23AQ15436 765 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 AXDND1Q5T1B0 1012 aaPredicted RBP6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 GALNT17Q6IS24 598 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 CTR9Q6PD62 1173 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 TMTC3Q6ZXV5 915 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 DHX40Q8IX18 779 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 ENAHQ8N8S7 591 aaPredicted RBP6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 ANKRD20A12PQ8NF67 263 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 TBC1D22AQ8WUA7 517 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 CCDC47Q96A33 483 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 AIFM3Q96NN9 605 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 MAP3K14Q99558 947 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 GOLGA2P5Q9HBQ8 144 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 SH3GLB2Q9NR46 395 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 RAD18Q9NS91 495 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 AATFQ9NY61 560 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 TFCP2L1Q9NZI6 479 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 SRP68Q9UHB9 627 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 TUBE1Q9UJT0 475 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 HPSEQ9Y251 543 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 ACTL7BQ9Y614 415 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 SYNGAP1Q96PV0 1343 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 MAST2Q6P0Q8 1798 aa6.66□□□□□ -1.34
ATPAF1-204ENST00000474020 BIN1O00499 593 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 BBOX1O75936 387 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 F13BP05160 661 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 TPM1P09493 284 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 TSPY3P0CV98 308 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 TSPY8P0CW00 308 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 SKILP12757 684 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 ATP2B1P20020 1258 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 DYNLL1P63167 89 aaKnown RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 PLCB3Q01970 1234 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 KCNA1Q09470 495 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 DPCR1Q3MIW9 517 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 CFAP100Q494V2 611 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 TTC38Q5R3I4 469 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 SHC4Q6S5L8 630 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 DTHD1Q6ZMT9 781 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 C15orf52Q6ZUT6 534 aaKnown RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 TMC6Q7Z403 805 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 ADGRA1Q86SQ6 560 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 DGKHQ86XP1 1220 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 LRRC8AQ8IWT6 810 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 RASSF8Q8NHQ8 419 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 BCO2Q9BYV7 579 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 GTPBP4Q9BZE4 634 aaKnown RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 OSBPL5Q9H0X9 879 aaPredicted RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 PDCL3Q9H2J4 239 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 GSX1Q9H4S2 264 aaPredicted RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 CABP5Q9NP86 173 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 DCP1AQ9NPI6 582 aaPredicted RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 INCENPQ9NQS7 918 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 RMND1Q9NWS8 449 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 TRPC5Q9UL62 973 aaPredicted RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 KCNJ14Q9UNX9 436 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 SRPRBQ9Y5M8 271 aaKnown RBP6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 IVNS1ABPQ9Y6Y0 642 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 CHD4Q14839 1912 aa6.65□□□□□ -1.34
ATPAF1-204ENST00000474020 MROH7-TTC4A0A0A0MT08 1334 aa6.65□□□□□ -1.35
ATPAF1-204ENST00000474020 COL24A1Q17RW2 1714 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 PNMA6FA0A0J9YX94 578 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 CCDC194A0A1B0GVG4 234 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 GOLGA6L9A6NEM1 432 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms