RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 VTI1AQ96AJ9 217 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 CSRNP2Q9H175 543 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 RNPEPQ9H4A4 650 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 RGL1Q9NZL6 768 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 KDM3AQ9Y4C1 1321 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 COL1A2P08123 1366 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 TRIP12Q14669 1992 aaPredicted RBP17.92■□□□□ 0.46
GPC1-207ENST00000466624 POTEB3A0JP26 581 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 MED24O75448 989 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 MARK3P27448 753 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 CYP4A11Q02928 519 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 POTEBQ6S5H4 581 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 CKAP2LQ8IYA6 745 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 CHAMP1Q96JM3 812 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 MMTAG2Q9BU76 263 aaKnown RBP17.92■□□□□ 0.46
GPC1-207ENST00000466624 CCSER1Q9C0I3 900 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 NRBP2Q9NSY0 501 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 WRAP73Q9P2S5 460 aaPredicted RBP17.92■□□□□ 0.46
GPC1-207ENST00000466624 GTF2IRD1Q9UHL9 959 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 NRCAMQ92823 1304 aa17.92■□□□□ 0.46
GPC1-207ENST00000466624 RRN3P2A6NIE6 340 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 PP2D1A8MPX8 630 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 STBD1O95210 358 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 SMIM10L2AP0DMW4 78 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 SMIM10L2BP0DMW5 78 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 XRCC6P12956 609 aaKnown RBP eCLIP17.91■□□□□ 0.46
GPC1-207ENST00000466624 CCT6AP40227 531 aaKnown RBP17.91■□□□□ 0.46
GPC1-207ENST00000466624 UBA7P41226 1012 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 CTTNQ14247 550 aaKnown RBP17.91■□□□□ 0.46
GPC1-207ENST00000466624 AXDND1Q5T1B0 1012 aaPredicted RBP17.91■□□□□ 0.46
GPC1-207ENST00000466624 ANKRD33Q7Z3H0 272 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 TPH2Q8IWU9 490 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 TOX2Q96NM4 488 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 CLIC6Q96NY7 704 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 NIFKQ9BYG3 293 aaKnown RBP17.91■□□□□ 0.46
GPC1-207ENST00000466624 NT5C3AQ9H0P0 336 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 HDAC6Q9UBN7 1215 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 PCDHA7Q9UN72 937 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 TRPC6Q9Y210 931 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 PPME1Q9Y570 386 aa17.91■□□□□ 0.46
GPC1-207ENST00000466624 GNAT1P11488 350 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 ME1P48163 572 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 ADAM17P78536 824 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 PPFIA1Q13136 1202 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 ZNF484Q5JVG2 852 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 CLEC17AQ6ZS10 378 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 OTUD6AQ7L8S5 288 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 CABP7Q86V35 215 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 NACC1Q96RE7 527 aa17.9■□□□□ 0.46
GPC1-207ENST00000466624 C17orf102A2RUQ5 167 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 INSRRP14616 1297 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 CDC25AP30304 524 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 YWHABP31946 246 aaKnown RBP17.89■□□□□ 0.45
GPC1-207ENST00000466624 TXLNAP40222 546 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
GPC1-207ENST00000466624 GRIK4Q16099 956 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 FAM47CQ5HY64 1035 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 ADALQ6DHV7 355 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 ANO5Q75V66 913 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 FAM126BQ8IXS8 530 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 SYMPKQ92797 1274 aaKnown RBP17.89■□□□□ 0.45
GPC1-207ENST00000466624 CALML4Q96GE6 196 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 HTATIP2Q9BUP3 242 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 ANKEF1Q9NU02 776 aa17.89■□□□□ 0.45
GPC1-207ENST00000466624 MBLAC1A4D2B0 266 aaPredicted RBP17.88■□□□□ 0.45
GPC1-207ENST00000466624 TLR3O15455 904 aaKnown RBP17.88■□□□□ 0.45
GPC1-207ENST00000466624 RTP1P59025 263 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 CHMP4BP1P59074 171 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 TARBP2Q15633 366 aaKnown RBP17.88■□□□□ 0.45
GPC1-207ENST00000466624 ECM1Q16610 540 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 LRRC26Q2I0M4 334 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 TMEM119Q4V9L6 283 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 POTEGQ6S5H5 508 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 LMBR1Q8WVP7 490 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 EPSTI1Q96J88 318 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 CDK5RAP3Q96JB5 506 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 SETD4Q9NVD3 440 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 CCDC39Q9UFE4 941 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 SEPT9Q9UHD8 586 aaPredicted RBP17.88■□□□□ 0.45
GPC1-207ENST00000466624 DBR1Q9UK59 544 aaKnown RBP17.88■□□□□ 0.45
GPC1-207ENST00000466624 EVPLQ92817 2033 aa17.88■□□□□ 0.45
GPC1-207ENST00000466624 DDX11L8A8MPP1 907 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 ZBTB42B2RXF5 422 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 CD4P01730 458 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 GRB10Q13322 594 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 TRIM60Q495X7 471 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 RESP18Q5W5W9 173 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 GDF6Q6KF10 455 aaPredicted RBP17.87■□□□□ 0.45
GPC1-207ENST00000466624 SHC4Q6S5L8 630 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 USP49Q70CQ1 688 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 EXOC8Q8IYI6 725 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 TMEM87AQ8NBN3 555 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 PNMA5Q96PV4 448 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 CEP89Q96ST8 783 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 CYP26B1Q9NR63 512 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 DDX19AQ9NUU7 478 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms