RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 DTX3Q8N9I9 347 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 ATL2Q8NHH9 583 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 WDR66Q8TBY9 1149 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 GBP4Q96PP9 640 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 C11orf84Q9BUA3 381 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 PCIF1Q9H4Z3 704 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 CD320Q9NPF0 282 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 TOMM22Q9NS69 142 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 CNOT6Q9ULM6 557 aaKnown RBP6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 SMG5Q9UPR3 1016 aaKnown RBP6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 FAN1Q9Y2M0 1017 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 NPIPB6E9PJ23 425 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 IL18BPO95998 194 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 CPEP16870 476 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 IBSPP21815 317 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 TERF2Q15554 542 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 PHF19Q5T6S3 580 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 VASNQ6EMK4 673 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 AMNQ9BXJ7 453 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 MS4A5Q9H3V2 200 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 MCM8Q9UJA3 840 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 APOBEC2Q9Y235 224 aaKnown RBP6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 ASB1Q9Y576 335 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 IRAK3Q9Y616 596 aa6.32□□□□□ -1.4
HMGB3P6-201ENST00000444896 PRAMEF22A3QJZ6 481 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 LCHNA4D1U4 455 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 DBX1A6NMT0 343 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 NUAK1O60285 661 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 PI3P19957 117 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 PTGS1P23219 599 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 PHC1P78364 1004 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 DLX2Q07687 328 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 EPHA7Q15375 998 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 KCNA10Q16322 511 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 SKIDA1Q1XH10 827 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 BROXQ5VW32 411 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 PRAMEF18Q5VWM3 479 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 RNF219Q5W0B1 726 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 CILP2Q8IUL8 1156 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 KYQ8NBH2 561 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 IGDCC4Q8TDY8 1250 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 FNIP1Q8TF40 1166 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 SLC5A5Q92911 643 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 PCDH18Q9HCL0 1135 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 VTA1Q9NP79 307 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 SPATA6Q9NWH7 488 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 UCKL1Q9NWZ5 548 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 KCTD3Q9Y597 815 aa6.31□□□□□ -1.4
HMGB3P6-201ENST00000444896 hCG_2014768A0A024R1R8 64 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 IGBP1P78318 339 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 TMPRSS15P98073 1019 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 LRRC32Q14392 662 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZNF385BQ569K4 471 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 GPR158Q5T848 1215 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 CNKSR3Q6P9H4 555 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 C11orf74Q86VG3 221 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 PASD1Q8IV76 773 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 CLRN3Q8NCR9 226 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 RTF1Q92541 710 aaKnown RBP6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 ERCC4Q92889 916 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 SCYL1Q96KG9 808 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 TMEM209Q96SK2 561 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 DLL4Q9NR61 685 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 ARHGAP28Q9P2N2 729 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 PMF1-BGLAPU3KQ54 211 aa6.3□□□□□ -1.4
HMGB3P6-201ENST00000444896 WASHC2CQ9Y4E1 1318 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 ULK1O75385 1050 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 LSP1P33241 339 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 VWA3BQ502W6 1294 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 SPATS2Q86XZ4 545 aaKnown RBP6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZNF610Q8N9Z0 462 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 HIPK4Q8NE63 616 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 COG1Q8WTW3 980 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZBTB8AQ96BR9 441 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZNF496Q96IT1 587 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 PWWP2AQ96N64 755 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 TRIM8Q9BZR9 551 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 INCENPQ9NQS7 918 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 GALNT8Q9NY28 637 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 SLC5A4Q9NY91 659 aa6.29□□□□□ -1.4
HMGB3P6-201ENST00000444896 PRKD3O94806 890 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 GLRBP48167 497 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 LINC00310P59036 64 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 ALDH6A1Q02252 535 aaKnown RBP6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 DDB1Q16531 1140 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 RASSF3Q86WH2 238 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 LRRC56Q8IYG6 542 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZZZ3Q8IYH5 903 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 TTLL6Q8N841 843 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 STAG1Q8WVM7 1258 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 DACT3Q96B18 629 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 ZDHHC5Q9C0B5 715 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 KCND1Q9NSA2 647 aa6.28□□□□□ -1.4
HMGB3P6-201ENST00000444896 ARHGAP20Q9P2F6 1191 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms