RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 CLASP2O75122 1294 aaKnown RBP8.72□□□□□ -1.01
SSXP3-201ENST00000442971 EPN2O95208 641 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 CTSHP09668 335 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 GBP2P32456 591 aaPredicted RBP8.72□□□□□ -1.01
SSXP3-201ENST00000442971 RDXP35241 583 aaKnown RBP8.72□□□□□ -1.01
SSXP3-201ENST00000442971 PSEN2P49810 448 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 ICA1Q05084 483 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 HIC1Q14526 733 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 SPOUT1Q5T280 376 aaKnown RBP8.72□□□□□ -1.01
SSXP3-201ENST00000442971 TCEAL6Q6IPX3 200 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 RSPO2Q6UXX9 243 aaPredicted RBP8.72□□□□□ -1.01
SSXP3-201ENST00000442971 TSPYL6Q8N831 410 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 PRPF38AQ8NAV1 312 aaKnown RBP8.72□□□□□ -1.01
SSXP3-201ENST00000442971 TCEAL3Q969E4 200 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 NELL2Q99435 816 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 ACAD9Q9H845 621 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 EPS15L1Q9UBC2 864 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 PUF60Q9UHX1 559 aaKnown RBP8.72□□□□□ -1.01
SSXP3-201ENST00000442971 SPAG17Q6Q759 2223 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 CACNA1EQ15878 2313 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 C2orf16Q68DN1 1984 aa8.72□□□□□ -1.01
SSXP3-201ENST00000442971 CHURC1-FNTBB4DL54 471 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 CASTP20810 708 aaKnown RBP8.71□□□□□ -1.02
SSXP3-201ENST00000442971 TARSP26639 723 aaKnown RBP8.71□□□□□ -1.02
SSXP3-201ENST00000442971 ABCG1P45844 678 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 FNTBP49356 437 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 GPC5P78333 572 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 SERINC3Q13530 473 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 SLC44A4Q53GD3 710 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 TMC7Q7Z402 723 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 DHX37Q8IY37 1157 aaKnown RBP8.71□□□□□ -1.02
SSXP3-201ENST00000442971 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
SSXP3-201ENST00000442971 PIP4K2CQ8TBX8 421 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.02
SSXP3-201ENST00000442971 PRORYQ9H606 182 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 VPS45Q9NRW7 570 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
SSXP3-201ENST00000442971 IL17BQ9UHF5 180 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 FLNCQ14315 2725 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 ATMQ13315 3056 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 TSC2P49815 1807 aa8.71□□□□□ -1.02
SSXP3-201ENST00000442971 SPAARA0A1B0GVQ0 90 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 F6X3S4 739 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 SLC28A2O43868 658 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 SIM1P81133 766 aaPredicted RBP8.7□□□□□ -1.02
SSXP3-201ENST00000442971 FZD5Q13467 585 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 MFSD10Q14728 455 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 KIAA0753Q2KHM9 967 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 NAA16Q6N069 864 aaPredicted RBP8.7□□□□□ -1.02
SSXP3-201ENST00000442971 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 ANKRD44Q8N8A2 993 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 MRPL43Q8N983 215 aaKnown RBP8.7□□□□□ -1.02
SSXP3-201ENST00000442971 KATNAL1Q9BW62 490 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 MFRPQ9BY79 579 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 SLC38A10Q9HBR0 1119 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 GOPCQ9HD26 462 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 CEP126Q9P2H0 1117 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 LRP2BPQ9P2M1 347 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 LRRK2Q5S007 2527 aa8.7□□□□□ -1.02
SSXP3-201ENST00000442971 COL5A1P20908 1838 aaPredicted RBP8.69□□□□□ -1.02
SSXP3-201ENST00000442971 ITPR2Q14571 2701 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 C2orf71A6NGG8 1288 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 CAND2O75155 1236 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 TXNP10599 105 aaKnown RBP8.69□□□□□ -1.02
SSXP3-201ENST00000442971 EPCAMP16422 314 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 MPLP40238 635 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 USP5P45974 858 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 GATMP50440 423 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 CCR3P51677 355 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 OAZ1P54368 228 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 PLCB3Q01970 1234 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 GABPAQ06546 454 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 PCSK4Q6UW60 755 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 PI16Q6UXB8 463 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 RAB44Q7Z6P3 723 aaPredicted RBP8.69□□□□□ -1.02
SSXP3-201ENST00000442971 ADGRA1Q86SQ6 560 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 CABP7Q86V35 215 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 LONP2Q86WA8 852 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 COLGALT1Q8NBJ5 622 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 SCFD2Q8WU76 684 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 NANOS1Q8WY41 292 aaKnown RBP8.69□□□□□ -1.02
SSXP3-201ENST00000442971 USP26Q9BXU7 913 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 HMG20BQ9P0W2 317 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 PCDHGA5Q9Y5G8 931 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 LCTP09848 1927 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 PLXNB3Q9ULL4 1909 aa8.69□□□□□ -1.02
SSXP3-201ENST00000442971 ASCC3Q8N3C0 2202 aaKnown RBP8.68□□□□□ -1.02
SSXP3-201ENST00000442971 PCNX1Q96RV3 2341 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 HAS3O00219 553 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 NBPF7P0C2Y1 421 aaPredicted RBP8.68□□□□□ -1.02
SSXP3-201ENST00000442971 RAP1GAPP47736 663 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 GNAI1P63096 354 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 DYNLL1P63167 89 aaKnown RBP8.68□□□□□ -1.02
SSXP3-201ENST00000442971 SMC1AQ14683 1233 aaKnown RBP8.68□□□□□ -1.02
SSXP3-201ENST00000442971 CCNI2Q6ZMN8 369 aaPredicted RBP8.68□□□□□ -1.02
SSXP3-201ENST00000442971 SPATA5Q8NB90 893 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 NUP88Q99567 741 aaPredicted RBP8.68□□□□□ -1.02
SSXP3-201ENST00000442971 CHRDQ9H2X0 955 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms