RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 IQCF3P0C7M6 154 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 ATP2B1P20020 1258 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 LARP1BQ659C4 914 aaKnown RBP19.94■□□□□ 0.78
CCDC188-201ENST00000439765 CAGE1Q8TC20 777 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 NAP1L4Q99733 375 aaKnown RBP19.94■□□□□ 0.78
CCDC188-201ENST00000439765 FOXP1Q9H334 677 aaPredicted RBP19.94■□□□□ 0.78
CCDC188-201ENST00000439765 KCNMB3Q9NPA1 279 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 ZNF302Q9NR11 478 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 MICAL3Q7RTP6 2002 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 NCOR1O75376 2440 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 TTC28Q96AY4 2481 aa19.94■□□□□ 0.78
CCDC188-201ENST00000439765 IGKV6D-21A0A0A0MT36 114 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 TREHO43280 583 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 PSAPP07602 524 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 PDCP20941 246 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 DDIT3P35638 169 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 IGBP1P78318 339 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 RBL2Q08999 1139 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 PLCB4Q15147 1175 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 GRIK4Q16099 956 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 FAM160B1Q5W0V3 765 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 SWSAP1Q6NVH7 229 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 PDXDC2PQ6P474 469 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 CCDC155Q8N6L0 562 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 RETREG2Q8NC44 543 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 MSRAQ9UJ68 235 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 PCDHA10Q9Y5I2 948 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 SLC4A7Q9Y6M7 1214 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 LOXHD1Q8IVV2 1947 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 NRCAMQ92823 1304 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 EVPLQ92817 2033 aa19.93■□□□□ 0.78
CCDC188-201ENST00000439765 SYT1P21579 422 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 PTK7Q13308 1070 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 PLPPR4Q7Z2D5 763 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 TRMT1LQ7Z2T5 733 aaKnown RBP19.92■□□□□ 0.78
CCDC188-201ENST00000439765 SERINC5Q86VE9 423 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 NOSTRINQ8IVI9 506 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 AFAP1L1Q8TED9 768 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 DISC1Q9NRI5 854 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 ARID2Q68CP9 1835 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 IGSF9BQ9UPX0 1349 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 RBAK-RBAKDNI3L0D1 243 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 MARCH6O60337 910 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 NEMFO60524 1076 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 GNAT1P11488 350 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 ACTN1P12814 892 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 MCTP1Q6DN14 999 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 DEFB128Q7Z7B8 93 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 CKAP2LQ8IYA6 745 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 TRAPPC12Q8WVT3 735 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 HAS1Q92839 578 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 ZBTB10Q96DT7 871 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 GABBR1Q9UBS5 961 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 TUBE1Q9UJT0 475 aa19.92■□□□□ 0.78
CCDC188-201ENST00000439765 PRRC2BQ5JSZ5 2229 aaKnown RBP19.91■□□□□ 0.78
CCDC188-201ENST00000439765 POTEB3A0JP26 581 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 H3BQV1 296 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 CKBP12277 381 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 PDIA4P13667 645 aaKnown RBP19.91■□□□□ 0.78
CCDC188-201ENST00000439765 INSRRP14616 1297 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 SFNP31947 248 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 MCM7P33993 719 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 JAK3P52333 1124 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 CALCRLQ16602 461 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 POTEBQ6S5H4 581 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 MIER3Q7Z3K6 550 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 FAM20AQ96MK3 541 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 VAV3Q9UKW4 847 aa19.91■□□□□ 0.78
CCDC188-201ENST00000439765 YBX2Q9Y2T7 364 aaKnown RBP19.91■□□□□ 0.78
CCDC188-201ENST00000439765 ZBBXA8MT70 800 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 ATP2A2P16615 1042 aaKnown RBP19.9■□□□□ 0.78
CCDC188-201ENST00000439765 THPOP40225 353 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 SLC26A2P50443 739 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 ADAM17P78536 824 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 UGCGQ16739 394 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 TRIM71Q2Q1W2 868 aaKnown RBP19.9■□□□□ 0.78
CCDC188-201ENST00000439765 LRRC8DQ7L1W4 858 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 ATP8B4Q8TF62 1192 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 NKX2-4Q9H2Z4 354 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 SLC28A3Q9HAS3 691 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 PCDHA11Q9Y5I1 949 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 MAFBQ9Y5Q3 323 aaPredicted RBP19.9■□□□□ 0.78
CCDC188-201ENST00000439765 TRANK1O15050 2925 aa19.9■□□□□ 0.78
CCDC188-201ENST00000439765 TBX3O15119 743 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 STX6O43752 255 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 PARNO95453 639 aaKnown RBP19.89■□□□□ 0.77
CCDC188-201ENST00000439765 CTSHP09668 335 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 U2AF2P26368 475 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCDC188-201ENST00000439765 NBR1Q14596 966 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 MARCH8Q5T0T0 291 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 B3GNT9Q6UX72 402 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 RUFY4Q6ZNE9 571 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 SLC9A7Q96T83 725 aa19.89■□□□□ 0.77
CCDC188-201ENST00000439765 CIZ1Q9ULV3 898 aaPredicted RBP19.89■□□□□ 0.77
CCDC188-201ENST00000439765 BAIAP3O94812 1187 aa19.88■□□□□ 0.77
CCDC188-201ENST00000439765 SELPP16109 830 aa19.88■□□□□ 0.77
CCDC188-201ENST00000439765 ATP4AP20648 1035 aa19.88■□□□□ 0.77
CCDC188-201ENST00000439765 PRKCEQ02156 737 aa19.88■□□□□ 0.77
CCDC188-201ENST00000439765 PPP2R5CQ13362 524 aa19.88■□□□□ 0.77
CCDC188-201ENST00000439765 ZNF618Q5T7W0 954 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms