RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MARCH6O60337 910 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 CCNT1O60563 726 aaKnown RBP6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 TDP2O95551 362 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 CFHP08603 1231 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 SUPT20HL2P0C7V6 817 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 CSF2RAP15509 400 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 KRT2P35908 639 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 USP11P51784 963 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 EPHB4P54760 987 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 ACTR2P61160 394 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 IGBP1P78318 339 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 FPGSQ05932 587 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 NR5A1Q13285 461 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 SHHQ15465 462 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 GALNT17Q6IS24 598 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 MFSD5Q6N075 450 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 SWSAP1Q6NVH7 229 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 NFRKBQ6P4R8 1299 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 KRT25Q7Z3Z0 450 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 DEFB128Q7Z7B8 93 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 TMEM199Q8N511 208 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 RETREG2Q8NC44 543 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 DAGLBQ8NCG7 672 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 CRYGNQ8WXF5 182 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 C8orf76Q96K31 380 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 LLPHQ9BRT6 129 aaKnown RBP6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 KATNAL1Q9BW62 490 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 SEZ6LQ9BYH1 1024 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 HIPK3Q9H422 1215 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 JPH1Q9HDC5 661 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 SH2B1Q9NRF2 756 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 LTBP2Q14767 1821 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 SCN5AQ14524 2016 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 C17orf102A2RUQ5 167 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 BACH1O14867 736 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 DHX15O43143 795 aaKnown RBP6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 TREHO43280 583 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 CHMP2AO43633 222 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 CCNE2O96020 404 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 MMP1P03956 469 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 SMIM10L2AP0DMW4 78 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 SMIM10L2BP0DMW5 78 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 CIITAP33076 1130 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 BMP8BP34820 402 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 STAT5BP51692 787 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 GNL2Q13823 731 aaKnown RBP6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 C9orf50Q5SZB4 431 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 ZNF365Q70YC5 407 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 C16orf59Q7L2K0 433 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 TEX2Q8IWB9 1127 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 DIS3L2Q8IYB7 885 aaKnown RBP6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 ATP6V0A1Q93050 837 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 ZBTB10Q96DT7 871 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 PCYT2Q99447 389 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 NOC4LQ9BVI4 516 aaKnown RBP6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 SMARCAD1Q9H4L7 1026 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 AZI2Q9H6S1 392 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 BRMS1Q9HCU9 246 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 ZNF302Q9NR11 478 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 TBC1D22BQ9NU19 505 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 GTF2IRD1Q9UHL9 959 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 TCEAL9Q9UHQ7 104 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 TBX21Q9UL17 535 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 MYH9P35579 1960 aaKnown RBP6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 SCN10AQ9Y5Y9 1956 aa6.53□□□□□ -1.36
HMGB3P24-201ENST00000433260 NFASCO94856 1347 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 WDR81Q562E7 1941 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 SLC37A4O43826 429 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 GAS7O60861 476 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 ATG7O95352 703 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 F2P00734 622 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 FGBP02675 491 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 IQCF3P0C7M6 154 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 HOXD8P13378 290 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 INSRRP14616 1297 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 GJB2P29033 226 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 THPOP40225 353 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 BFSP2Q13515 415 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 SAFBQ15424 915 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZNF174Q15697 407 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 Q4G0T1 1027 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 LRCH2Q5VUJ6 765 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 MIS18BP1Q6P0N0 1132 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 ABHD15Q6UXT9 468 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 NIPA1Q7RTP0 329 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 OTOP2Q7RTS6 562 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 NEK8Q86SG6 692 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 SESTD1Q86VW0 696 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 CKAP2LQ8IYA6 745 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 TDHQ8IZJ6 230 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 TRAPPC12Q8WVT3 735 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 WNT8BQ93098 351 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 LENG9Q96B70 501 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 KCTD12Q96CX2 325 aaKnown RBP6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 CTAGE1Q96RT6 745 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 TEKT3Q9BXF9 490 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms