RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 KCNK3O14649 394 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 ADAM17P78536 824 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 FIGNQ5HY92 759 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 GGNQ86UU5 652 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 JMYQ8N9B5 988 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 SLC7A14Q8TBB6 771 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 THAP3Q8WTV1 239 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 DNAJC2Q99543 621 aaKnown RBP7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 GPR20Q99678 358 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 ARHGAP28Q9P2N2 729 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 H0Y858 1186 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 RASGRP1O95267 797 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 GJA4P35212 333 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 EPHB4P54760 987 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 LACTBP83111 547 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 GSTCDQ8NEC7 633 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 CHST13Q8NET6 341 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 BORCS6Q96GS4 357 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 AJUBAQ96IF1 538 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 C8orf49Q96NF6 230 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 SMURF1Q9HCE7 757 aa7.34□□□□□ -1.23
HMGB3P5-201ENST00000428894 CCDC163A0A0D9SF12 145 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 INSRRP14616 1297 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 ZXDCQ2QGD7 858 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 TRIM61Q5EBN2 209 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 RALYLQ86SE5 291 aaKnown RBP7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 LILRB2Q8N423 598 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 CISD2Q8N5K1 135 aaKnown RBP7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 TTC9BQ8N6N2 239 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 PTPN18Q99952 460 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 COQ6Q9Y2Z9 468 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 PTCH2Q9Y6C5 1203 aa7.33□□□□□ -1.24
HMGB3P5-201ENST00000428894 FGD5Q6ZNL6 1462 aa7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 PRAMEF25A6NGN4 478 aa7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 CLASP2O75122 1294 aaKnown RBP7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 C4BPAP04003 597 aaKnown RBP7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 CSF2RBP32927 897 aa7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 DPP8Q6V1X1 898 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 SCLYQ96I15 445 aa7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 OSBPL2Q9H1P3 480 aa7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 SFMBT1Q9UHJ3 866 aa7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 ST6GALNAC2Q9UJ37 374 aa7.32□□□□□ -1.24
HMGB3P5-201ENST00000428894 PTGS1P23219 599 aa7.31□□□□□ -1.24
HMGB3P5-201ENST00000428894 C2orf27AQ580R0 203 aa7.31□□□□□ -1.24
HMGB3P5-201ENST00000428894 GPR155Q7Z3F1 870 aa7.31□□□□□ -1.24
HMGB3P5-201ENST00000428894 SREK1Q8WXA9 508 aaKnown RBP7.31□□□□□ -1.24
HMGB3P5-201ENST00000428894 MRPL4Q9BYD3 311 aaKnown RBP7.31□□□□□ -1.24
HMGB3P5-201ENST00000428894 JAG2Q9Y219 1238 aa7.31□□□□□ -1.24
HMGB3P5-201ENST00000428894 KIF13AQ9H1H9 1805 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 ESYT3A0FGR9 886 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 SCDO00767 359 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 GPR42O15529 346 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 CPZQ66K79 652 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 SLFN13Q68D06 897 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 BRAPQ7Z569 592 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 CIR1Q86X95 450 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 REXO1L1PQ8IX06 675 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 CELF4Q9BZC1 486 aaKnown RBP7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 KATNBL1Q9H079 304 aa7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 CDK11AQ9UQ88 783 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P5-201ENST00000428894 PBRM1Q86U86 1689 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 CNOT4O95628 575 aaKnown RBP7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 ZNF20P17024 532 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 AOAHP28039 575 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 HERVK_113P62684 666 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 PUM1Q14671 1186 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 ICAM4Q14773 271 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 SEC23AQ15436 765 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 WDR72Q3MJ13 1102 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 FGD2Q7Z6J4 655 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 INCENPQ9NQS7 918 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 GALNT8Q9NY28 637 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 BTBD7Q9P203 1132 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 MYRFQ9Y2G1 1151 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 PTPN22Q9Y2R2 807 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 SLC4A7Q9Y6M7 1214 aa7.29□□□□□ -1.24
HMGB3P5-201ENST00000428894 TCRBV16S1A1N1A0A5B0 115 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 KCNQ2O43526 872 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 ZNF888P0CJ79 500 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 KCNA6P17658 529 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 POLD1P28340 1107 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 MC4RP32245 332 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 TOP3AQ13472 1001 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 BMS1Q14692 1282 aaKnown RBP7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 USP10Q14694 798 aaKnown RBP7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 NFE2L2Q16236 605 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 OVCH1Q7RTY7 1134 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 NOSTRINQ8IVI9 506 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 IFNL2Q8IZJ0 200 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 C1QTNF3Q9BXJ4 246 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 CARD11Q9BXL7 1154 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 NCOA5Q9HCD5 579 aaKnown RBP7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
HMGB3P5-201ENST00000428894 CUTAO60888 179 aa7.27□□□□□ -1.25
HMGB3P5-201ENST00000428894 MMEP08473 750 aa7.27□□□□□ -1.25
HMGB3P5-201ENST00000428894 IL13RA1P78552 427 aa7.27□□□□□ -1.25
HMGB3P5-201ENST00000428894 ABHD17CQ6PCB6 329 aa7.27□□□□□ -1.25
HMGB3P5-201ENST00000428894 IGSF22Q8N9C0 903 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms