RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ASB2Q96Q27 587 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 C17orf80Q9BSJ5 609 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 SH3GLB2Q9NR46 395 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 GINS2Q9Y248 185 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 PCDHA2Q9Y5H9 948 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 HBP1O60381 514 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 DTNBO60941 627 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 DEXIO95424 95 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 PSAPP07602 524 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
NUP50-206ENST00000422489 CD52P31358 61 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 SLC26A2P50443 739 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 FBXO47Q5MNV8 452 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
NUP50-206ENST00000422489 NME8Q8N427 588 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 CRYGNQ8WXF5 182 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 IL17RAQ96F46 866 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 CELF4Q9BZC1 486 aaKnown RBP10.53□□□□□ -0.72
NUP50-206ENST00000422489 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
NUP50-206ENST00000422489 SUGCTQ9HAC7 445 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 GABBR1Q9UBS5 961 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 PCDHA4Q9UN74 947 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 TRPV2Q9Y5S1 764 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 SCN5AQ14524 2016 aa10.53□□□□□ -0.72
NUP50-206ENST00000422489 NID2Q14112 1375 aa10.52□□□□□ -0.72
NUP50-206ENST00000422489 IGKV6D-21A0A0A0MT36 114 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 SMIM35A0A1B0GVV1 85 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 CHMP2AO43633 222 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 RPLP2P05387 115 aaKnown RBP10.52□□□□□ -0.73
NUP50-206ENST00000422489 CIITAP33076 1130 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 USP11P51784 963 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 HTRA4P83105 476 aaPredicted RBP10.52□□□□□ -0.73
NUP50-206ENST00000422489 SETQ01105 290 aaPredicted RBP10.52□□□□□ -0.73
NUP50-206ENST00000422489 KRT76Q01546 638 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 TFF2Q03403 129 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 NFX1Q12986 1120 aaKnown RBP10.52□□□□□ -0.73
NUP50-206ENST00000422489 GPM6BQ13491 265 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 ERICH6BQ5W0A0 696 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 ZNF746Q6NUN9 644 aaPredicted RBP10.52□□□□□ -0.73
NUP50-206ENST00000422489 TSHZ1Q6ZSZ6 1077 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 BLIDQ8IZY5 108 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 TBCKQ8TEA7 893 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 ATP8B4Q8TF62 1192 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 PPP1R16BQ96T49 567 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 AGO3Q9H9G7 860 aaKnown RBP10.52□□□□□ -0.73
NUP50-206ENST00000422489 KCNJ14Q9UNX9 436 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 PCDHA10Q9Y5I2 948 aa10.52□□□□□ -0.73
NUP50-206ENST00000422489 MYH7BA7E2Y1 1941 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 MSH4O15457 936 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 LPXNO60711 386 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 GAS7O60861 476 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 CDKL5O76039 1030 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
NUP50-206ENST00000422489 ATP4AP20648 1035 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 PAK2Q13177 524 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
NUP50-206ENST00000422489 TMEM266Q2M3C6 531 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 EPC2Q52LR7 807 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 RTN4RL1Q86UN2 441 aaPredicted RBP10.51□□□□□ -0.73
NUP50-206ENST00000422489 TMEM192Q8IY95 271 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 SMAP1Q8IYB5 467 aaPredicted RBP10.51□□□□□ -0.73
NUP50-206ENST00000422489 FIBCD1Q8N539 461 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 METTL13Q8N6R0 699 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 GJA10Q969M2 543 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 TEKT3Q9BXF9 490 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 C22orf23Q9BZE7 217 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 DISC1Q9NRI5 854 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 NRBP2Q9NSY0 501 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 PADI3Q9ULW8 664 aa10.51□□□□□ -0.73
NUP50-206ENST00000422489 MAFBQ9Y5Q3 323 aaPredicted RBP10.51□□□□□ -0.73
NUP50-206ENST00000422489 WDR64B1ANS9 1081 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 EDIL3O43854 480 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 TDP2O95551 362 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 SCRN1Q12765 414 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 BTG3Q14201 252 aaPredicted RBP10.5□□□□□ -0.73
NUP50-206ENST00000422489 AAK1Q2M2I8 961 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 LRCH2Q5VUJ6 765 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 KIAA0319LQ8IZA0 1049 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 SP7Q8TDD2 431 aaPredicted RBP10.5□□□□□ -0.73
NUP50-206ENST00000422489 ADAMTS19Q8TE59 1207 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 BBXQ8WY36 941 aaPredicted RBP10.5□□□□□ -0.73
NUP50-206ENST00000422489 HLA-CQ95604 372 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 SAMD11Q96NU1 681 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 LMCD1Q9NZU5 365 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 LRFN2Q9ULH4 789 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 TPCN1Q9ULQ1 816 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 COG5Q9UP83 839 aa10.5□□□□□ -0.73
NUP50-206ENST00000422489 NOC2LQ9Y3T9 749 aaKnown RBP10.5□□□□□ -0.73
NUP50-206ENST00000422489 CCDC194A0A1B0GVG4 234 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 MARCH6O60337 910 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 PFKFB2O60825 505 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 RPS6KA5O75582 802 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 STAG3L1P0CL83 205 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 XBP1P17861 261 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 CTNNB1P35222 781 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 KCNQ1P51787 676 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms