RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 KRT40Q6A162 431 aa28.96■■■□□ 2.23
SMDT1-202ENST00000422252 CCDC60Q8IWA6 550 aaPredicted RBP28.96■■■□□ 2.23
SMDT1-202ENST00000422252 PCDHA2Q9Y5H9 948 aa28.96■■■□□ 2.23
SMDT1-202ENST00000422252 SIP14410 1827 aa28.95■■■□□ 2.23
SMDT1-202ENST00000422252 UPP2O95045 317 aa28.95■■■□□ 2.22
SMDT1-202ENST00000422252 IER5Q5VY09 327 aa28.95■■■□□ 2.22
SMDT1-202ENST00000422252 SP7Q8TDD2 431 aaPredicted RBP28.95■■■□□ 2.22
SMDT1-202ENST00000422252 GDPD5Q8WTR4 605 aa28.95■■■□□ 2.22
SMDT1-202ENST00000422252 ZNF302Q9NR11 478 aa28.95■■■□□ 2.22
SMDT1-202ENST00000422252 COL4A4P53420 1690 aaPredicted RBP28.94■■■□□ 2.22
SMDT1-202ENST00000422252 HBP1O60381 514 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 DEXIO95424 95 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 MRPS5P82675 430 aaKnown RBP28.94■■■□□ 2.22
SMDT1-202ENST00000422252 STK3Q13188 491 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 ZNF746Q6NUN9 644 aaPredicted RBP28.94■■■□□ 2.22
SMDT1-202ENST00000422252 SWSAP1Q6NVH7 229 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 CPLX2Q6PUV4 134 aaKnown RBP28.94■■■□□ 2.22
SMDT1-202ENST00000422252 TSHZ1Q6ZSZ6 1077 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 ATP8B4Q8TF62 1192 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 ASB2Q96Q27 587 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 YME1L1Q96TA2 773 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 SUGCTQ9HAC7 445 aa28.94■■■□□ 2.22
SMDT1-202ENST00000422252 PRRC2BQ5JSZ5 2229 aaKnown RBP28.93■■■□□ 2.22
SMDT1-202ENST00000422252 M0QZ92 97 aa28.93■■■□□ 2.22
SMDT1-202ENST00000422252 SKIV2LQ15477 1246 aaKnown RBP28.93■■■□□ 2.22
SMDT1-202ENST00000422252 PDXDC2PQ6P474 469 aa28.93■■■□□ 2.22
SMDT1-202ENST00000422252 MTHFD1LQ6UB35 978 aa28.93■■■□□ 2.22
SMDT1-202ENST00000422252 SMAP1Q8IYB5 467 aaPredicted RBP28.93■■■□□ 2.22
SMDT1-202ENST00000422252 LENG9Q96B70 501 aa28.93■■■□□ 2.22
SMDT1-202ENST00000422252 LMCD1Q9NZU5 365 aa28.93■■■□□ 2.22
SMDT1-202ENST00000422252 TCEAL9Q9UHQ7 104 aa28.93■■■□□ 2.22
SMDT1-202ENST00000422252 SMIM35A0A1B0GVV1 85 aa28.92■■■□□ 2.22
SMDT1-202ENST00000422252 USP11P51784 963 aa28.92■■■□□ 2.22
SMDT1-202ENST00000422252 KRT76Q01546 638 aa28.92■■■□□ 2.22
SMDT1-202ENST00000422252 PCDHA4Q9UN74 947 aa28.92■■■□□ 2.22
SMDT1-202ENST00000422252 TRPV2Q9Y5S1 764 aa28.92■■■□□ 2.22
SMDT1-202ENST00000422252 SQORQ9Y6N5 450 aa28.92■■■□□ 2.22
SMDT1-202ENST00000422252 REV3LO60673 3130 aa28.92■■■□□ 2.22
SMDT1-202ENST00000422252 COL1A2P08123 1366 aa28.91■■■□□ 2.22
SMDT1-202ENST00000422252 TMEM62Q0P6H9 643 aa28.91■■■□□ 2.22
SMDT1-202ENST00000422252 NME8Q8N427 588 aa28.91■■■□□ 2.22
SMDT1-202ENST00000422252 C17orf80Q9BSJ5 609 aa28.91■■■□□ 2.22
SMDT1-202ENST00000422252 PCDHA10Q9Y5I2 948 aa28.91■■■□□ 2.22
SMDT1-202ENST00000422252 EDIL3O43854 480 aa28.9■■■□□ 2.22
SMDT1-202ENST00000422252 PSAPP07602 524 aa28.9■■■□□ 2.22
SMDT1-202ENST00000422252 KLRC1P26715 233 aa28.9■■■□□ 2.22
SMDT1-202ENST00000422252 ZNF484Q5JVG2 852 aa28.9■■■□□ 2.22
SMDT1-202ENST00000422252 FBXO22Q8NEZ5 403 aa28.9■■■□□ 2.22
SMDT1-202ENST00000422252 C22orf23Q9BZE7 217 aa28.9■■■□□ 2.22
SMDT1-202ENST00000422252 AGO3Q9H9G7 860 aaKnown RBP28.9■■■□□ 2.22
SMDT1-202ENST00000422252 SPTBN5Q9NRC6 3674 aaKnown RBP28.9■■■□□ 2.22
SMDT1-202ENST00000422252 MAFBQ9Y5Q3 323 aaPredicted RBP28.9■■■□□ 2.22
SMDT1-202ENST00000422252 ENPP3O14638 875 aa28.89■■■□□ 2.22
SMDT1-202ENST00000422252 ATP4AP20648 1035 aa28.89■■■□□ 2.22
SMDT1-202ENST00000422252 CD52P31358 61 aa28.89■■■□□ 2.22
SMDT1-202ENST00000422252 CKAP2LQ8IYA6 745 aa28.89■■■□□ 2.22
SMDT1-202ENST00000422252 FAM177A1Q8N128 213 aaPredicted RBP28.89■■■□□ 2.22
SMDT1-202ENST00000422252 TBCKQ8TEA7 893 aa28.89■■■□□ 2.22
SMDT1-202ENST00000422252 SAMD11Q96NU1 681 aa28.89■■■□□ 2.22
SMDT1-202ENST00000422252 CELF4Q9BZC1 486 aaKnown RBP28.89■■■□□ 2.22
SMDT1-202ENST00000422252 COL4A6Q14031 1691 aa28.89■■■□□ 2.21
SMDT1-202ENST00000422252 MSH4O15457 936 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 ANAPC15P60006 121 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 BLIDQ8IZY5 108 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 DAGLBQ8NCG7 672 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 BBXQ8WY36 941 aaPredicted RBP28.88■■■□□ 2.21
SMDT1-202ENST00000422252 AIFM3Q96NN9 605 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 SAMM50Q9Y512 469 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 IGSF9BQ9UPX0 1349 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 KDM3AQ9Y4C1 1321 aa28.88■■■□□ 2.21
SMDT1-202ENST00000422252 ZBTB42B2RXF5 422 aa28.87■■■□□ 2.21
SMDT1-202ENST00000422252 CDKL5O76039 1030 aa28.87■■■□□ 2.21
SMDT1-202ENST00000422252 SCRN1Q12765 414 aa28.87■■■□□ 2.21
SMDT1-202ENST00000422252 GALNT17Q6IS24 598 aa28.87■■■□□ 2.21
SMDT1-202ENST00000422252 IL17RAQ96F46 866 aa28.87■■■□□ 2.21
SMDT1-202ENST00000422252 GABBR1Q9UBS5 961 aa28.87■■■□□ 2.21
SMDT1-202ENST00000422252 WDR64B1ANS9 1081 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 M0R2N6 131 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 EPC2Q52LR7 807 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 IL27Q8NEV9 243 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 RIT2Q99578 217 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 FTHL17Q9BXU8 183 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 SLKQ9H2G2 1235 aaPredicted RBP28.86■■■□□ 2.21
SMDT1-202ENST00000422252 PADI3Q9ULW8 664 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 COG5Q9UP83 839 aa28.86■■■□□ 2.21
SMDT1-202ENST00000422252 TFF2Q03403 129 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 PAK2Q13177 524 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 NPY5RQ15761 445 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 AAK1Q2M2I8 961 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 Q4G0T1 1027 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 KIAA0319LQ8IZA0 1049 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 LINC01599Q8WXQ3 324 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 SLC5A5Q92911 643 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 DISC1Q9NRI5 854 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 TPCN1Q9ULQ1 816 aa28.85■■■□□ 2.21
SMDT1-202ENST00000422252 PFKFB2O60825 505 aa28.84■■■□□ 2.21
SMDT1-202ENST00000422252 GAS7O60861 476 aa28.84■■■□□ 2.21
SMDT1-202ENST00000422252 TRMT1LQ7Z2T5 733 aaKnown RBP28.84■■■□□ 2.21
SMDT1-202ENST00000422252 TMEM192Q8IY95 271 aa28.84■■■□□ 2.21
SMDT1-202ENST00000422252 FIBCD1Q8N539 461 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms