RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 VWCEQ96DN2 955 aa25.16■■□□□ 1.62
PTCD3-203ENST00000409783 COLQQ9Y215 455 aaPredicted RBP25.16■■□□□ 1.62
PTCD3-203ENST00000409783 CCL23P55773 120 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 PRKCEQ02156 737 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 PTGDRQ13258 359 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 BFSP2Q13515 415 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 NCAPH2Q6IBW4 605 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 RUFY4Q6ZNE9 571 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 BANK1Q8NDB2 785 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 TNPO1Q92973 898 aaKnown RBP25.15■■□□□ 1.62
PTCD3-203ENST00000409783 ZBTB10Q96DT7 871 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 TUBE1Q9UJT0 475 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 COL1A2P08123 1366 aa25.15■■□□□ 1.62
PTCD3-203ENST00000409783 OATP04181 439 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 HSP90AA1P07900 732 aaKnown RBP25.14■■□□□ 1.62
PTCD3-203ENST00000409783 CKBP12277 381 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 CSF2RAP15509 400 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 IGBP1P78318 339 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 FPGSQ05932 587 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 CKAP2LQ8IYA6 745 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 SPRYD3Q8NCJ5 442 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 SCLYQ96I15 445 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 FAM167AQ96KS9 214 aa25.14■■□□□ 1.62
PTCD3-203ENST00000409783 WRAP73Q9P2S5 460 aaPredicted RBP25.14■■□□□ 1.62
PTCD3-203ENST00000409783 RANBP2P49792 3224 aaKnown RBP25.14■■□□□ 1.61
PTCD3-203ENST00000409783 EVPLQ92817 2033 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 POTEMA6NI47 508 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 P4HBP07237 508 aaKnown RBP25.13■■□□□ 1.61
PTCD3-203ENST00000409783 IQCF3P0C7M6 154 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 PSMC5P62195 406 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 GPNMBQ14956 572 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 ZNF484Q5JVG2 852 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 C16orf59Q7L2K0 433 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 TMEM199Q8N511 208 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 CCDC155Q8N6L0 562 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 HSD17B14Q9BPX1 270 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 RGL1Q9NZL6 768 aa25.13■■□□□ 1.61
PTCD3-203ENST00000409783 TET1Q8NFU7 2136 aa25.12■■□□□ 1.61
PTCD3-203ENST00000409783 QARSP47897 775 aaKnown RBP25.12■■□□□ 1.61
PTCD3-203ENST00000409783 ZNF618Q5T7W0 954 aa25.12■■□□□ 1.61
PTCD3-203ENST00000409783 TRMT1LQ7Z2T5 733 aaKnown RBP25.12■■□□□ 1.61
PTCD3-203ENST00000409783 RPAINQ86UA6 219 aa25.12■■□□□ 1.61
PTCD3-203ENST00000409783 DYDC2Q96IM9 177 aa25.12■■□□□ 1.61
PTCD3-203ENST00000409783 EIF2AK1Q9BQI3 630 aaKnown RBP25.12■■□□□ 1.61
PTCD3-203ENST00000409783 UBE2OQ9C0C9 1292 aaKnown RBP25.12■■□□□ 1.61
PTCD3-203ENST00000409783 SLITRK3O94933 977 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 SELPP16109 830 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 TECP42680 631 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 FXR2P51116 673 aaKnown RBP eCLIP25.11■■□□□ 1.61
PTCD3-203ENST00000409783 ATP2C1P98194 919 aaPredicted RBP25.11■■□□□ 1.61
PTCD3-203ENST00000409783 TARBP2Q15633 366 aaKnown RBP25.11■■□□□ 1.61
PTCD3-203ENST00000409783 IL17AQ16552 155 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 XKR3Q5GH77 459 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 TAF2Q6P1X5 1199 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 MTHFD1LQ6UB35 978 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 RETREG2Q8NC44 543 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 CEP89Q96ST8 783 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 NIFKQ9BYG3 293 aaKnown RBP25.11■■□□□ 1.61
PTCD3-203ENST00000409783 NRBP2Q9NSY0 501 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 PCDHA2Q9Y5H9 948 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 MYH15Q9Y2K3 1946 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 SIP14410 1827 aa25.11■■□□□ 1.61
PTCD3-203ENST00000409783 TMEM150BA6NC51 233 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 LAD1O00515 517 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 C22orf31O95567 290 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 KLRC1P26715 233 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 PRPHP41219 470 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 PPIGQ13427 754 aaKnown RBP eCLIP25.1■■□□□ 1.614e-7■□□□□ 9.9
PTCD3-203ENST00000409783 MBTPS1Q14703 1052 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 FAM173BQ6P4H8 233 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 ANO5Q75V66 913 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 LRRC8DQ7L1W4 858 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 C4orf19Q8IY42 314 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 LXNQ9BS40 222 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 IL23AQ9NPF7 189 aa25.1■■□□□ 1.61
PTCD3-203ENST00000409783 RBAK-RBAKDNI3L0D1 243 aa25.09■■□□□ 1.61
PTCD3-203ENST00000409783 CAND2O75155 1236 aa25.09■■□□□ 1.61
PTCD3-203ENST00000409783 THPOP40225 353 aa25.09■■□□□ 1.61
PTCD3-203ENST00000409783 CYP4A11Q02928 519 aa25.09■■□□□ 1.61
PTCD3-203ENST00000409783 CTTNQ14247 550 aaKnown RBP25.09■■□□□ 1.61
PTCD3-203ENST00000409783 IGSF22Q8N9C0 903 aa25.09■■□□□ 1.61
PTCD3-203ENST00000409783 ARID2Q68CP9 1835 aa25.09■■□□□ 1.61
PTCD3-203ENST00000409783 TRIOBPQ9H2D6 2365 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 SMIM35A0A1B0GVV1 85 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 LYPLA2O95372 231 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 SPATA31C1P0DKV0 1188 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 ACRP10323 421 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 FAM26DQ5JW98 314 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 C9orf50Q5SZB4 431 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 LINC01465Q8N7H1 131 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 NEK9Q8TD19 979 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 DNAJB3Q8WWF6 145 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 ZSCAN16Q9H4T2 348 aaPredicted RBP25.08■■□□□ 1.61
PTCD3-203ENST00000409783 ZSWIM4Q9H7M6 989 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 CEP131Q9UPN4 1083 aa25.08■■□□□ 1.61
PTCD3-203ENST00000409783 DDX11L8A8MPP1 907 aa25.07■■□□□ 1.6
PTCD3-203ENST00000409783 DKC1O60832 514 aaKnown RBP eCLIP25.07■■□□□ 1.6
PTCD3-203ENST00000409783 PDIA4P13667 645 aaKnown RBP25.07■■□□□ 1.6
PTCD3-203ENST00000409783 RFC2P35250 354 aa25.07■■□□□ 1.6
PTCD3-203ENST00000409783 PKP1Q13835 747 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms