RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TUSC3Q13454 348 aa6.37□□□□□ -1.39
CLK1-203ENST00000409769 ZNF585AQ6P3V2 769 aa6.37□□□□□ -1.39
CLK1-203ENST00000409769 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.37□□□□□ -1.39
CLK1-203ENST00000409769 NOP9Q86U38 636 aaKnown RBP6.37□□□□□ -1.39
CLK1-203ENST00000409769 NUDT10Q8NFP7 164 aa6.37□□□□□ -1.39
CLK1-203ENST00000409769 CLEC4DQ8WXI8 215 aa6.37□□□□□ -1.39
CLK1-203ENST00000409769 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
CLK1-203ENST00000409769 MRPL4Q9BYD3 311 aaKnown RBP6.37□□□□□ -1.39
CLK1-203ENST00000409769 ARHGAP20Q9P2F6 1191 aa6.37□□□□□ -1.39
CLK1-203ENST00000409769 PTCH2Q9Y6C5 1203 aa6.37□□□□□ -1.39
CLK1-203ENST00000409769 FAM47E-STBD1D6RA91 191 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 WNT9AO14904 365 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 SUV39H1O43463 412 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 ACVRL1P37023 503 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 EPHA5P54756 1037 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 GRIN1Q05586 938 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 SKIDA1Q1XH10 827 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 ZNF568Q3ZCX4 644 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 HABP4Q5JVS0 413 aaKnown RBP6.36□□□□□ -1.39
CLK1-203ENST00000409769 KCNT2Q6UVM3 1135 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 GSTCDQ8NEC7 633 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 VPS11Q9H270 941 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 KCND1Q9NSA2 647 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 TMEM260Q9NX78 707 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 USP35Q9P2H5 1018 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 ZFP69BQ9UJL9 534 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 DSEQ9UL01 958 aa6.36□□□□□ -1.39
CLK1-203ENST00000409769 GOLGA3Q08378 1498 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 SNAPC4Q5SXM2 1469 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 MAGI1Q96QZ7 1491 aaPredicted RBP6.35□□□□□ -1.39
CLK1-203ENST00000409769 RAPGEF2Q9Y4G8 1499 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 ASXL2Q76L83 1435 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 CARMIL1Q5VZK9 1371 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 BLACEA4D250 179 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 CUTAO60888 179 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 EFCAB14O75071 495 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 CKMP06732 381 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 HMGA2P52926 109 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 SQSTM1Q13501 440 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 R3HDM1Q15032 1099 aaKnown RBP6.35□□□□□ -1.39
CLK1-203ENST00000409769 CD276Q5ZPR3 534 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 KCTD1Q719H9 257 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 SYNPOQ8N3V7 929 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 SH3TC2Q8TF17 1288 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 ALG1Q9BT22 464 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 ZNF747Q9BV97 191 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 KATNBL1Q9H079 304 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 RBPJLQ9UBG7 517 aa6.35□□□□□ -1.39
CLK1-203ENST00000409769 PPARGC1AQ9UBK2 798 aaKnown RBP6.35□□□□□ -1.39
CLK1-203ENST00000409769 FHAD1B1AJZ9 1412 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 ZNF839A8K0R7 811 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 H0Y858 1186 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 CNOT4O95628 575 aaKnown RBP6.34□□□□□ -1.39
CLK1-203ENST00000409769 SOD2P04179 222 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 CSF2RBP32927 897 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 PFKPQ01813 784 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 DPP8Q6V1X1 898 aaPredicted RBP6.34□□□□□ -1.39
CLK1-203ENST00000409769 PALM2Q8IXS6 379 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 Q8TCH9 128 aa6.34□□□□□ -1.39
CLK1-203ENST00000409769 RNPC3Q96LT9 517 aaKnown RBP6.34□□□□□ -1.39
CLK1-203ENST00000409769 LOC105371045A0A1W2PR82 267 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 ARVCFO00192 962 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 PLD2O14939 933 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 USP10Q14694 798 aaKnown RBP6.33□□□□□ -1.4
CLK1-203ENST00000409769 FNDC3BQ53EP0 1204 aaKnown RBP6.33□□□□□ -1.4
CLK1-203ENST00000409769 NLGN4XQ8N0W4 816 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 Q8N1X5 172 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 WWC2-AS2Q96NR7 200 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 LMF1Q96S06 567 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 NCOA5Q9HCD5 579 aaKnown RBP6.33□□□□□ -1.4
CLK1-203ENST00000409769 MSL2Q9HCI7 577 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 SYNJ2O15056 1496 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 CTTNBP2Q8WZ74 1663 aa6.33□□□□□ -1.4
CLK1-203ENST00000409769 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.32□□□□□ -1.4
CLK1-203ENST00000409769 PAK1Q13153 545 aa6.32□□□□□ -1.4
CLK1-203ENST00000409769 STPG3Q8N7X2 389 aa6.32□□□□□ -1.4
CLK1-203ENST00000409769 PTPN18Q99952 460 aa6.32□□□□□ -1.4
CLK1-203ENST00000409769 CARD11Q9BXL7 1154 aa6.32□□□□□ -1.4
CLK1-203ENST00000409769 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
CLK1-203ENST00000409769 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
CLK1-203ENST00000409769 CHD1O14646 1710 aa6.32□□□□□ -1.4
CLK1-203ENST00000409769 TNIKQ9UKE5 1360 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 GRIN2AQ12879 1464 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 NKRFO15226 690 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLK1-203ENST00000409769 RFPL3O75679 317 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 COL6A2P12110 1019 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 POLD1P28340 1107 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 GLRBP48167 497 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 PRKD1Q15139 912 aaPredicted RBP6.31□□□□□ -1.4
CLK1-203ENST00000409769 ZMAT1Q5H9K5 638 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 GIMAP8Q8ND71 665 aaPredicted RBP6.31□□□□□ -1.4
CLK1-203ENST00000409769 KCNJ15Q99712 375 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 MRIQ9BWK5 157 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 KANSL2Q9H9L4 492 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 SLC52A2Q9HAB3 445 aa6.31□□□□□ -1.4
CLK1-203ENST00000409769 LTFP02788 710 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 AMHP03971 560 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 SPDYAQ5MJ70 313 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 PHF19Q5T6S3 580 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 TCTN3Q6NUS6 607 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms