RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 M0QZ92 97 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 CHRNA1P02708 482 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 MARK3P27448 753 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 PLCB4Q15147 1175 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 ZNF484Q5JVG2 852 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 ATXN2LQ8WWM7 1075 aaKnown RBP16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 IL17RAQ96F46 866 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 RIT2Q99578 217 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 PCDHA4Q9UN74 947 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 PCDHA10Q9Y5I2 948 aa16.49■□□□□ 0.23
NIF3L1-205ENST00000409588 SMIM35A0A1B0GVV1 85 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 BACH1O14867 736 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 PSAPP07602 524 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 DEFB103AP81534 67 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 HTRA4P83105 476 aaPredicted RBP16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 ADGRE1Q14246 886 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 DAGLBQ8NCG7 672 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 FTHL17Q9BXU8 183 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 ZNF302Q9NR11 478 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 VPS54Q9P1Q0 977 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 COL1A2P08123 1366 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 UNC80Q8N2C7 3258 aa16.48■□□□□ 0.23
NIF3L1-205ENST00000409588 CCNE2O96020 404 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 CTSHP09668 335 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 ERVK-21P61565 698 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 PRR16Q569H4 304 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 ODR4Q5SWX8 454 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 IER5LQ5T953 404 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 DNAJB3Q8WWF6 145 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 WASF1Q92558 559 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 TGS1Q96RS0 853 aaKnown RBP16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 CEP131Q9UPN4 1083 aa16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 MAFBQ9Y5Q3 323 aaPredicted RBP16.47■□□□□ 0.23
NIF3L1-205ENST00000409588 KDM3AQ9Y4C1 1321 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 DOCK5Q9H7D0 1870 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 CYP3A7-CYP3A51PA0A087WV96 503 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 PFKFB2O60825 505 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 CYP3A7P24462 503 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 SFNP31947 248 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 IGBP1P78318 339 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 MRPS6P82932 125 aaKnown RBP16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 MGAT3Q09327 533 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 TCTN1Q2MV58 587 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 Q4G0T1 1027 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 PDXDC2PQ6P474 469 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 MTHFD1LQ6UB35 978 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.46■□□□□ 0.236e-6■■■□□ 19.1
NIF3L1-205ENST00000409588 RUFY4Q6ZNE9 571 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 MYOCDQ8IZQ8 938 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 BLIDQ8IZY5 108 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 ARNTL2Q8WYA1 636 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
NIF3L1-205ENST00000409588 CHD7Q9P2D1 2997 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 TRANK1O15050 2925 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 WDR64B1ANS9 1081 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 KLRC1P26715 233 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 AAK1Q2M2I8 961 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 FBXO47Q5MNV8 452 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 NAP1L4Q99733 375 aaKnown RBP16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 NRBP2Q9NSY0 501 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 MTCH2Q9Y6C9 303 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 GBF1Q92538 1859 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 MYO9BQ13459 2157 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 EYSQ5T1H1 3165 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 STK36Q9NRP7 1315 aa16.45■□□□□ 0.22
NIF3L1-205ENST00000409588 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 LINC01553A4QN01 128 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 M0R2N6 131 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 ENPP3O14638 875 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 MAGEB2O15479 319 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 JAK3P52333 1124 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 STK3Q13188 491 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 LPIN1Q14693 890 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 TJAP1Q5JTD0 557 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 KRT25Q7Z3Z0 450 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 CCDC60Q8IWA6 550 aaPredicted RBP16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 CKAP2LQ8IYA6 745 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 TBCKQ8TEA7 893 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 LENG9Q96B70 501 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 FAM212AQ96EL1 285 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 CELF4Q9BZC1 486 aaKnown RBP16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 SAMM50Q9Y512 469 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 TRPV2Q9Y5S1 764 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 CDY2AQ9Y6F7 541 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 PRUNE2Q8WUY3 3088 aa16.44■□□□□ 0.22
NIF3L1-205ENST00000409588 DDX39AO00148 427 aaKnown RBP16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 MSH4O15457 936 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms