RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FTOQ9C0B1 505 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZMYND12Q9H0C1 365 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 SEMA6BQ9H3T3 888 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 RNPEPQ9H4A4 650 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 EHMT1Q9H9B1 1298 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 C6orf50Q9HD87 102 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 KCNH7Q9NS40 1196 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 SETD4Q9NVD3 440 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 TPCN1Q9ULQ1 816 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 KAT6AQ92794 2004 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 CDH23Q9H251 3354 aa6.58□□□□□ -1.36
HMGB1P20-201ENST00000402555 TTC28Q96AY4 2481 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 ESYT2A0FGR8 921 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 FAM86B1E9PN63 330 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 MEIS1O00470 390 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CPLX1O14810 134 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 NBNO60934 754 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 NR1I2O75469 434 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 LARGE1O95461 756 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 ADH1BP00325 375 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CTSHP09668 335 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 FAM86B2P0C5J1 330 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 SELPP16109 830 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZNF76P36508 570 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 THPOP40225 353 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 AK2P54819 239 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 SSRP1Q08945 709 aaKnown RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 SCRN1Q12765 414 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 PTK7Q13308 1070 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 MBTPS1Q14703 1052 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 GRIN2CQ14957 1233 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CEP55Q53EZ4 464 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 TRAF7Q6Q0C0 670 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 TMCO2Q7Z6W1 182 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 SERINC5Q86VE9 423 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 PLA2G4DQ86XP0 818 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CCDC155Q8N6L0 562 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 GIMAP8Q8ND71 665 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CAGE1Q8TC20 777 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 AFAP1L1Q8TED9 768 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CCDC12Q8WUD4 166 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 LMBR1Q8WVP7 490 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CRYGNQ8WXF5 182 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 MYLIPQ8WY64 445 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 SEPT1Q8WYJ6 367 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 ATP6V0A1Q93050 837 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZBTB10Q96DT7 871 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZNF274Q96GC6 653 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 PCYT2Q99447 389 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 CDX2Q99626 313 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 OSBPL7Q9BZF2 842 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 GLT8D2Q9H1C3 349 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 NKX2-4Q9H2Z4 354 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 AGO4Q9HCK5 861 aaKnown RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 JPH1Q9HDC5 661 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 SLC9A2Q9UBY0 812 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 YBX2Q9Y2T7 364 aaKnown RBP6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 SLC4A7Q9Y6M7 1214 aa6.57□□□□□ -1.36
HMGB1P20-201ENST00000402555 IGLV3-22A0A075B6J6 115 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 MAFGO15525 162 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 EDIL3O43854 480 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 DEXIO95424 95 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 CTDNEP1O95476 244 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 CCNE2O96020 404 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 ATP2A2P16615 1042 aaKnown RBP6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 GNA11P29992 359 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 HOXC8P31273 242 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 RFC2P35250 354 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 NLRP5P59047 1200 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 ANAPC15P60006 121 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 ACTR2P61160 394 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 IGBP1P78318 339 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 RBL2Q08999 1139 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 PPFIA1Q13136 1202 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 RUFY4Q6ZNE9 571 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 TRIM22Q8IYM9 498 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 NECAB1Q8N987 351 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 CCDC148Q8NFR7 591 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 TRAPPC12Q8WVT3 735 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 GLG1Q92896 1179 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 GJA10Q969M2 543 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 TIFAQ96CG3 184 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 SDF4Q9BRK5 362 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 SLKQ9H2G2 1235 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 MTIF3Q9H2K0 278 aaKnown RBP6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZNF576Q9H609 170 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 GJB4Q9NTQ9 266 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 DAXXQ9UER7 740 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZNF215Q9UL58 517 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 KCNJ14Q9UNX9 436 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 STXBP5LQ9Y2K9 1186 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 PRUNE2Q8WUY3 3088 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 PTPRSQ13332 1948 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 TRANK1O15050 2925 aa6.56□□□□□ -1.36
HMGB1P20-201ENST00000402555 NFASCO94856 1347 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 RSPH10B2B2RC85 870 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 IPO5O00410 1097 aaKnown RBP6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 PFKFB2O60825 505 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms