RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 HINFPQ9BQA5 517 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 INO80BQ9C086 356 aaPredicted RBP15.32■□□□□ 0.04
SCAF4-202ENST00000399804 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 KCNK3O14649 394 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 MED24O75448 989 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 FERP16591 822 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 SMC1AQ14683 1233 aaKnown RBP15.31■□□□□ 0.04
SCAF4-202ENST00000399804 ZNF526Q8TF50 670 aaPredicted RBP15.31■□□□□ 0.04
SCAF4-202ENST00000399804 MKL1Q969V6 931 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 MXRA8Q9BRK3 442 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 KCNH7Q9NS40 1196 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 TSKSQ9UJT2 592 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 HYOU1Q9Y4L1 999 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 PCDHA10Q9Y5I2 948 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 HIP1RO75146 1068 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 SFNP31947 248 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 DMTNQ08495 405 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 GDAP1L1Q96MZ0 367 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 IRX2Q9BZI1 471 aaPredicted RBP15.31■□□□□ 0.04
SCAF4-202ENST00000399804 SEL1LQ9UBV2 794 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 ICAM1P05362 532 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 TCP1P17987 556 aaKnown RBP15.31■□□□□ 0.04
SCAF4-202ENST00000399804 PLCB3Q01970 1234 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 HDXQ7Z353 690 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 NUDT12Q9BQG2 462 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 PCDHA13Q9Y5I0 950 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 TCHHQ07283 1943 aa15.31■□□□□ 0.04
SCAF4-202ENST00000399804 K7ERI5 159 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 SERPING1P05155 500 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 SCYL3Q8IZE3 742 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 NT5C1BQ96P26 610 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 TRIM6Q9C030 488 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 UBE2TQ9NPD8 197 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 COL1A1P02452 1464 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 LMNB1P20700 586 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 LMAN1P49257 510 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 SYCE1Q8N0S2 351 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 AGPAT5Q9NUQ2 364 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 OGFRQ9NZT2 677 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 CYP11B2P19099 503 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 MDM2Q00987 491 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 ALCAMQ13740 583 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 CCDC125Q86Z20 511 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-202ENST00000399804 AMFRQ9UKV5 643 aa15.3■□□□□ 0.04
SCAF4-202ENST00000399804 BMP6P22004 513 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 SEL1L2Q5TEA6 688 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 MCPH1Q8NEM0 835 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 SLC5A4Q9NY91 659 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 RASAL2Q9UJF2 1139 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 MTUS1Q9ULD2 1270 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 NFIBO00712 420 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 MOCS3O95396 460 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 GYPCP04921 128 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 NEFHP12036 1026 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 CXCR5P32302 372 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 NT5DC1Q5TFE4 455 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 XXYLT1Q8NBI6 393 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 YDJCA8MPS7 323 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 ARP10275 920 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 GCLMP48507 274 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 RIT2Q99578 217 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 TRIM31Q9BZY9 425 aa15.29■□□□□ 0.04
SCAF4-202ENST00000399804 DENND3A2RUS2 1198 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 PDXKO00764 312 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 MYBP10242 640 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 YWHABP31946 246 aaKnown RBP15.28■□□□□ 0.04
SCAF4-202ENST00000399804 BACE1P56817 501 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 LIN9Q5TKA1 542 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 FKBP1CQ5VVH2 108 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 UBL4BQ8N7F7 174 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 CCDC26Q8TAB7 109 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 TNFRSF25Q93038 417 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 RPGRIP1Q96KN7 1286 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 CEP72Q9P209 647 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 TRIM49P0CI25 452 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 TRIM49CP0CI26 452 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 E2F4Q16254 413 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 ALKBH5Q6P6C2 394 aaKnown RBP15.28■□□□□ 0.04
SCAF4-202ENST00000399804 HAUS6Q7Z4H7 955 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 USP54Q70EL1 1684 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 A0A1W2PRG0 241 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 VCAM1P19320 739 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 TMOD1P28289 359 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCAF4-202ENST00000399804 IL17AQ16552 155 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
SCAF4-202ENST00000399804 INTS8Q75QN2 995 aaKnown RBP15.28■□□□□ 0.04
SCAF4-202ENST00000399804 NAP1L3Q99457 506 aaPredicted RBP15.28■□□□□ 0.04
SCAF4-202ENST00000399804 VPS33BQ9H267 617 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 USTQ9Y2C2 406 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms