RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 TCTN1Q2MV58 587 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 CNKSR3Q6P9H4 555 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 FBXO18Q8NFZ0 1043 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 RDM1Q8NG50 284 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 HAS1Q92839 578 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 PBX4Q9BYU1 374 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 OSBPL7Q9BZF2 842 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 SEMA6BQ9H3T3 888 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 GABBR1Q9UBS5 961 aa22.61■■□□□ 1.21
TMEM53-205ENST00000372244 TBX3O15119 743 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 JAK3P52333 1124 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 PHOSPHO2Q8TCD6 241 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 TRAPPC12Q8WVT3 735 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 BBXQ8WY36 941 aaPredicted RBP22.6■■□□□ 1.21
TMEM53-205ENST00000372244 ZBTB10Q96DT7 871 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 C8orf76Q96K31 380 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 SAMM50Q9Y512 469 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 TMEM265A0A087WTH1 108 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 ZBBXA8MT70 800 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 ZNF862O60290 1169 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 RPLP2P05387 115 aaKnown RBP22.6■■□□□ 1.21
TMEM53-205ENST00000372244 ATP2A2P16615 1042 aaKnown RBP22.6■■□□□ 1.21
TMEM53-205ENST00000372244 DNAJB2P25686 324 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 PBX2P40425 430 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 FOSBP53539 338 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 PLEKHG4Q58EX7 1191 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 ZNF484Q5JVG2 852 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 MTHFD1LQ6UB35 978 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 RSPH3Q86UC2 560 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 DNAJB3Q8WWF6 145 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 TMX3Q96JJ7 454 aa22.6■■□□□ 1.21
TMEM53-205ENST00000372244 TTYH1Q9H313 450 aaPredicted RBP22.6■■□□□ 1.21
TMEM53-205ENST00000372244 TANC1Q9C0D5 1861 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 CDH23Q9H251 3354 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 IGSF9BQ9UPX0 1349 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 COL1A2P08123 1366 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 ABHD14A-ACY1A0A1B0GW23 586 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 RBAK-RBAKDNI3L0D1 243 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 CTSHP09668 335 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 KLRC1P26715 233 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 MCM2P49736 904 aa22.59■■□□□ 1.21
TMEM53-205ENST00000372244 SMIM35A0A1B0GVV1 85 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 CHMP2AO43633 222 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 GUCY1B3Q02153 619 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 MGAT3Q09327 533 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 PPP2R5CQ13362 524 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 MKRN4PQ13434 485 aaPredicted RBP22.58■■□□□ 1.2
TMEM53-205ENST00000372244 IKBKEQ14164 716 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 SAFBQ15424 915 aaKnown RBP eCLIP22.58■■□□□ 1.2
TMEM53-205ENST00000372244 ZNF697Q5TEC3 545 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 MIER3Q7Z3K6 550 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 CKAP2LQ8IYA6 745 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 NME8Q8N427 588 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 DBF4BQ8NFT6 615 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 VAV3Q9UKW4 847 aa22.58■■□□□ 1.2
TMEM53-205ENST00000372244 TIFAQ96CG3 184 aa22.57■■□□□ 1.2
TMEM53-205ENST00000372244 FAM167AQ96KS9 214 aa22.57■■□□□ 1.2
TMEM53-205ENST00000372244 SLC9A7Q96T83 725 aa22.57■■□□□ 1.2
TMEM53-205ENST00000372244 FOXP1Q9H334 677 aaPredicted RBP22.57■■□□□ 1.2
TMEM53-205ENST00000372244 EML1O00423 815 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 EFCAB14O75071 495 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 WDR5P61964 334 aaKnown RBP22.56■■□□□ 1.2
TMEM53-205ENST00000372244 RAB30Q15771 203 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 UGCGQ16739 394 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 POTEDQ86YR6 584 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 KIAA0319LQ8IZA0 1049 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 FAM184AQ8NB25 1140 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 NRBP2Q9NSY0 501 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 MSRAQ9UJ68 235 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 PCDHA11Q9Y5I1 949 aa22.56■■□□□ 1.2
TMEM53-205ENST00000372244 WNT7AO00755 349 aa22.55■■□□□ 1.2
TMEM53-205ENST00000372244 STBD1O95210 358 aa22.55■■□□□ 1.2
TMEM53-205ENST00000372244 RABGGTBP53611 331 aa22.55■■□□□ 1.2
TMEM53-205ENST00000372244 SLFN12Q8IYM2 578 aa22.55■■□□□ 1.2
TMEM53-205ENST00000372244 GUCD1Q96NT3 240 aa22.55■■□□□ 1.2
TMEM53-205ENST00000372244 FAM49AQ9H0Q0 323 aaPredicted RBP22.55■■□□□ 1.2
TMEM53-205ENST00000372244 YBX2Q9Y2T7 364 aaKnown RBP22.55■■□□□ 1.2
TMEM53-205ENST00000372244 C22orf31O95567 290 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 OATP04181 439 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 MRPS6P82932 125 aaKnown RBP22.54■■□□□ 1.2
TMEM53-205ENST00000372244 SPIRE1Q08AE8 756 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 IER5Q5VY09 327 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 HERC6Q8IVU3 1022 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 SEPT8Q92599 483 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 FAM161BQ96MY7 647 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 ZNF576Q9H609 170 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 CEP131Q9UPN4 1083 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 CDY2AQ9Y6F7 541 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 CHD9Q3L8U1 2897 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 MYH9P35579 1960 aaKnown RBP22.54■■□□□ 1.2
TMEM53-205ENST00000372244 PRKCEQ02156 737 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 LPIN1Q14693 890 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 FBXO47Q5MNV8 452 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 TRMT1LQ7Z2T5 733 aaKnown RBP22.54■■□□□ 1.2
TMEM53-205ENST00000372244 MTMR9Q96QG7 549 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 NIFKQ9BYG3 293 aaKnown RBP22.54■■□□□ 1.2
TMEM53-205ENST00000372244 SQORQ9Y6N5 450 aa22.54■■□□□ 1.2
TMEM53-205ENST00000372244 MAGEB2O15479 319 aa22.53■■□□□ 1.2
TMEM53-205ENST00000372244 BAG4O95429 457 aaKnown RBP22.53■■□□□ 1.2
TMEM53-205ENST00000372244 U2AF2P26368 475 aaKnown RBP eCLIP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms