RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TAC1P20366 129 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 ZBTB18Q99592 522 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 LRFN2Q9ULH4 789 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 PASD1Q8IV76 773 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 SNX24Q9Y343 169 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 RASA4BC9J798 803 aa17.21■□□□□ 0.34
COL18A1-203ENST00000359759 RASA4O43374 803 aa17.21■□□□□ 0.34
COL18A1-203ENST00000359759 MOSPD1Q9UJG1 213 aa17.21■□□□□ 0.34
COL18A1-203ENST00000359759 APOBEC2Q9Y235 224 aaKnown RBP17.21■□□□□ 0.34
COL18A1-203ENST00000359759 SNX5Q9Y5X3 404 aa17.21■□□□□ 0.34
COL18A1-203ENST00000359759 PLCG1P19174 1290 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 DPP9Q86TI2 863 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 TTC30AQ86WT1 665 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 PUS3Q9BZE2 481 aaKnown RBP17.2■□□□□ 0.34
COL18A1-203ENST00000359759 TMEM60Q9H2L4 133 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 EMILIN3Q9NT22 766 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 ZNF711Q9Y462 761 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 WDR64B1ANS9 1081 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 LAD1O00515 517 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
COL18A1-203ENST00000359759 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
COL18A1-203ENST00000359759 SLC7A3Q8WY07 619 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 THAP9Q9H5L6 903 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 UBE3AQ05086 875 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 ADA2Q9NZK5 511 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 LZTS1Q9Y250 596 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 SYCP2Q9BX26 1530 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
COL18A1-203ENST00000359759 HSPA6P17066 643 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 TAF1BQ53T94 588 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-203ENST00000359759 MARCH10Q8NA82 808 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-203ENST00000359759 GANCQ8TET4 914 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 GREM2Q9H772 168 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 SUN2Q9UH99 717 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 SRGAP2CP0DJJ0 459 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
COL18A1-203ENST00000359759 CYP4F11Q9HBI6 524 aa17.2■□□□□ 0.34
COL18A1-203ENST00000359759 PYGLP06737 847 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 PYGBP11216 843 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 KCNA4P22459 653 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 CTTNQ14247 550 aaKnown RBP17.19■□□□□ 0.34
COL18A1-203ENST00000359759 KRT31Q15323 416 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 UNC5CLQ8IV45 518 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 CCND2P30279 289 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 ERFP50548 548 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 MECOMQ03112 1051 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 VPS11Q9H270 941 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 CCDC151A5D8V7 595 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 SNX2O60749 519 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 PPP6R3Q5H9R7 873 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-203ENST00000359759 SAAL1Q96ER3 474 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 PPP1R36Q96LQ0 422 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 TTC7AQ9ULT0 858 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-203ENST00000359759 IMPG1Q17R60 797 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 ZNF394Q53GI3 561 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 SRRM1Q8IYB3 904 aaKnown RBP17.19■□□□□ 0.34
COL18A1-203ENST00000359759 OSBPL1AQ9BXW6 950 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 PCDHB6Q9Y5E3 794 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 SEC24DO94855 1032 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-203ENST00000359759 MAGEA9P43362 315 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 MAGOHP61326 146 aaKnown RBP17.19■□□□□ 0.34
COL18A1-203ENST00000359759 TNFAIP1Q13829 316 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 SARS2Q9NP81 518 aaKnown RBP17.19■□□□□ 0.34
COL18A1-203ENST00000359759 USP21Q9UK80 565 aa17.19■□□□□ 0.34
COL18A1-203ENST00000359759 KCNA6P17658 529 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 TADA2BQ86TJ2 420 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 ZFYVE19Q96K21 471 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 PLA2G4BP0C869 781 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 CUL1Q13616 776 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 RNF139Q8WU17 664 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 TMEM206Q9H813 350 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 POLR3EQ9NVU0 708 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 SUPT3HO75486 399 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 MMP1P03956 469 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 RWDD2BP57060 319 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 FKBP3Q00688 224 aaKnown RBP17.18■□□□□ 0.34
COL18A1-203ENST00000359759 LRRC14Q15048 493 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 ACAD11Q709F0 780 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 TAGAPQ8N103 731 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 NAF1Q96HR8 494 aaKnown RBP17.18■□□□□ 0.34
COL18A1-203ENST00000359759 STX18Q9P2W9 335 aaKnown RBP17.18■□□□□ 0.34
COL18A1-203ENST00000359759 ITSN2Q9NZM3 1697 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 MAFGO15525 162 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 DIAPH2O60879 1101 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 MDH1BQ5I0G3 518 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 PDIK1LQ8N165 341 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 PDCD6IPQ8WUM4 868 aaKnown RBP17.18■□□□□ 0.34
COL18A1-203ENST00000359759 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
COL18A1-203ENST00000359759 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 APBA3O96018 575 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 ATP1A3P13637 1013 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 ANXA13P27216 316 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms