RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 PDE1AP54750 535 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 TMEM266Q2M3C6 531 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 NOM1Q5C9Z4 860 aaKnown RBP4.25□□□□□ -1.73
SMC1B-201ENST00000357450 MIER3Q7Z3K6 550 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 ZNF516Q92618 1163 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 GPKOWQ92917 476 aaPredicted RBP eCLIP4.25□□□□□ -1.73
SMC1B-201ENST00000357450 OSBP2Q969R2 916 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 CDHR1Q96JP9 859 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 MTRQ99707 1265 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 ATP6V0A4Q9HBG4 840 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 SETD4Q9NVD3 440 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 TMEM260Q9NX78 707 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 BTBD7Q9P203 1132 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 GBF1Q92538 1859 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 MYH10P35580 1976 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 FGAP02671 866 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 IDEP14735 1019 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 POLGP54098 1239 aaPredicted RBP4.25□□□□□ -1.73
SMC1B-201ENST00000357450 LRRC26Q2I0M4 334 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 C12orf60Q5U649 245 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 NCAPH2Q6IBW4 605 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 CTR9Q6PD62 1173 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 CCDC148Q8NFR7 591 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 BRF1Q92994 677 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 ADPGKQ9BRR6 497 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 ABCB11O95342 1321 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 DNM1LO00429 736 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 SPTLC1O15269 473 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 GBP1P32455 592 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 ATXN3P54252 364 aaPredicted RBP4.25□□□□□ -1.73
SMC1B-201ENST00000357450 MRPS5P82675 430 aaKnown RBP4.25□□□□□ -1.73
SMC1B-201ENST00000357450 GPM6BQ13491 265 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 LY6KQ17RY6 165 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 INF2Q27J81 1249 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 KLHL40Q2TBA0 621 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 XKR9Q5GH70 373 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 USP17L6PQ6QN14 398 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 SYCP3Q8IZU3 236 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 NPLOC4Q8TAT6 608 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 URGCPQ8TCY9 931 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 MAML3Q96JK9 1138 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 ZSCAN10Q96SZ4 725 aaPredicted RBP4.25□□□□□ -1.73
SMC1B-201ENST00000357450 TMEM47Q9BQJ4 181 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 WDR18Q9BV38 432 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 GPR108Q9NPR9 543 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 PDGFCQ9NRA1 345 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 TMX2Q9Y320 296 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 SMIM22K7EJ46 135 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 NRG2O14511 850 aaPredicted RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 TXLNAP40222 546 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 BIRC2Q13490 618 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 KRT32Q14532 448 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 TMEM132BQ14DG7 1078 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 NONOQ15233 471 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 ZSCAN23Q3MJ62 389 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 SLC39A5Q6ZMH5 540 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 TPH2Q8IWU9 490 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 SLC7A3Q8WY07 619 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 ATOH1Q92858 354 aaPredicted RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 PHKBQ93100 1093 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 HLA-CQ95604 372 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 CCDC47Q96A33 483 aaKnown RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 ARMC5Q96C12 935 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 HAUS7Q99871 368 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 C22orf23Q9BZE7 217 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 MTMR4Q9NYA4 1195 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 PGAP2Q9UHJ9 254 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 SPTAN1Q13813 2472 aaKnown RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 F5P12259 2224 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 A0A1W2PQ45 241 aaPredicted RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 A0A1W2PQY0 241 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 SMCO2A6NFE2 343 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 NFIBO00712 420 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 DUSP11O75319 330 aaKnown RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 KLRC2P26717 231 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 ARID4AP29374 1257 aaPredicted RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 NEK4P51957 841 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 EXOSC10Q01780 885 aaKnown RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 LAMC2Q13753 1193 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 UBE2SQ16763 222 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 QRICH1Q2TAL8 776 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 MSS51Q4VC12 460 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 ASPRV1Q53RT3 343 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 PLPP4Q5VZY2 271 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 GLB1LQ6UWU2 654 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 APBB1IPQ7Z5R6 666 aaPredicted RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 STRBPQ96SI9 672 aaKnown RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 CDX2Q99626 313 aaPredicted RBP4.24□□□□□ -1.73
SMC1B-201ENST00000357450 RAB34Q9BZG1 259 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 PDCL3Q9H2J4 239 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 TCRBV5S4A2TA0A5A2 114 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 H3BRB1 525 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 CDC45O75419 566 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 OR1G1P47890 313 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 OSTNP61366 133 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 CYP4A11Q02928 519 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 MTMR1Q13613 665 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 C9orf50Q5SZB4 431 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 IQSEC1Q6DN90 963 aa4.24□□□□□ -1.73
SMC1B-201ENST00000357450 CEP68Q76N32 757 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms