RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 Q4G0T1 1027 aa19.65■□□□□ 0.74
TRIM50-201ENST00000333149 ZNF571Q7Z3V5 609 aaPredicted RBP19.65■□□□□ 0.74
TRIM50-201ENST00000333149 CATSPER3Q86XQ3 398 aa19.65■□□□□ 0.74
TRIM50-201ENST00000333149 SP8Q8IXZ3 490 aa19.65■□□□□ 0.74
TRIM50-201ENST00000333149 LRRC57Q8N9N7 239 aa19.65■□□□□ 0.74
TRIM50-201ENST00000333149 USP40Q9NVE5 1235 aa19.65■□□□□ 0.74
TRIM50-201ENST00000333149 ARMCX3Q9UH62 379 aaPredicted RBP19.65■□□□□ 0.74
TRIM50-201ENST00000333149 SHTN1A0MZ66 631 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 ZSCAN5CA6NGD5 496 aaPredicted RBP19.64■□□□□ 0.74
TRIM50-201ENST00000333149 MEIS2O14770 477 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 KIF4AO95239 1232 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 AFPP02771 609 aaKnown RBP19.64■□□□□ 0.74
TRIM50-201ENST00000333149 PON1P27169 355 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 HOXD13P35453 343 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 NOP2P46087 812 aaKnown RBP19.64■□□□□ 0.74
TRIM50-201ENST00000333149 CACNB1Q02641 598 aaPredicted RBP19.64■□□□□ 0.74
TRIM50-201ENST00000333149 ARID5AQ03989 594 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 CERS5Q8N5B7 392 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 TAF4BQ92750 862 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 CALR3Q96L12 384 aaKnown RBP19.64■□□□□ 0.74
TRIM50-201ENST00000333149 ISCUQ9H1K1 167 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 PCDHA1Q9Y5I3 950 aa19.64■□□□□ 0.74
TRIM50-201ENST00000333149 RAD51CO43502 376 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 KRT18P05783 430 aaKnown RBP19.64■□□□□ 0.73
TRIM50-201ENST00000333149 SPATA31C1P0DKV0 1188 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 SLC9A1P19634 815 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 CASP5P51878 434 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 HHIPL2Q6UWX4 724 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 DCAF4Q8WV16 495 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 IFT81Q8WYA0 676 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 METTL14Q9HCE5 456 aaKnown RBP19.64■□□□□ 0.73
TRIM50-201ENST00000333149 NAGPAQ9UK23 515 aa19.64■□□□□ 0.73
TRIM50-201ENST00000333149 PACSIN2Q9UNF0 486 aaPredicted RBP19.64■□□□□ 0.73
TRIM50-201ENST00000333149 ESYT3A0FGR9 886 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 POTEFA5A3E0 1075 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 KRT14P02533 472 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 HLA-DOAP06340 250 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 POTEIP0CG38 1075 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 STAT3P40763 770 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 EPHA7Q15375 998 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 EXOC3L4Q17RC7 722 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 TTC31Q49AM3 519 aaPredicted RBP19.63■□□□□ 0.73
TRIM50-201ENST00000333149 POTEGQ6S5H5 508 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 POTEEQ6S8J3 1075 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 SLFN11Q7Z7L1 901 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 TADA2BQ86TJ2 420 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 KCTD17Q8N5Z5 321 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 ERMNQ8TAM6 284 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 TAF1DQ9H5J8 278 aaPredicted RBP19.63■□□□□ 0.73
TRIM50-201ENST00000333149 INTUQ9ULD6 942 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 DNM3Q9UQ16 869 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 ATXN2Q99700 1313 aaKnown RBP19.63■□□□□ 0.73
TRIM50-201ENST00000333149 A0A0A6YYK5 440 aaPredicted RBP19.63■□□□□ 0.73
TRIM50-201ENST00000333149 CALUO43852 315 aaPredicted RBP19.63■□□□□ 0.73
TRIM50-201ENST00000333149 ACTN1P12814 892 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 CDC42EP5Q6NZY7 148 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 PACS2Q86VP3 889 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 CCDC125Q86Z20 511 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 NYAP2Q9P242 653 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 FAM169AQ9Y6X4 670 aa19.63■□□□□ 0.73
TRIM50-201ENST00000333149 GTPBP10A4D1E9 387 aaKnown RBP19.62■□□□□ 0.73
TRIM50-201ENST00000333149 SRRM3A6NNA2 597 aaPredicted RBP19.62■□□□□ 0.73
TRIM50-201ENST00000333149 SLC16A3O15427 465 aaKnown RBP19.62■□□□□ 0.73
TRIM50-201ENST00000333149 MMP10P09238 476 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 MMP14P50281 582 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 JAM2P57087 298 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 ARHGAP4P98171 946 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 CUL1Q13616 776 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 ALKBH5Q6P6C2 394 aaKnown RBP19.62■□□□□ 0.73
TRIM50-201ENST00000333149 LRIG3Q6UXM1 1119 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 LENG9Q96B70 501 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 FAM20AQ96MK3 541 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 SPAG5Q96R06 1193 aa19.62■□□□□ 0.73
TRIM50-201ENST00000333149 TYW1Q9NV66 732 aaKnown RBP19.62■□□□□ 0.73
TRIM50-201ENST00000333149 ANKRD65E5RJM6 399 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 KCNK3O14649 394 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 XRCC5P13010 732 aaKnown RBP19.61■□□□□ 0.73
TRIM50-201ENST00000333149 NPEPPSP55786 919 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 PSMC6P62333 389 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 SFR1Q86XK3 245 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 RBM46Q8TBY0 533 aaKnown RBP19.61■□□□□ 0.73
TRIM50-201ENST00000333149 REEP2Q9BRK0 252 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 PAGR1Q9BTK6 254 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 SIX2Q9NPC8 291 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 HMGB1P1B2RPK0 211 aaPredicted RBP19.61■□□□□ 0.73
TRIM50-201ENST00000333149 FLOT1O75955 427 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 RPL13P26373 211 aaKnown RBP19.61■□□□□ 0.73
TRIM50-201ENST00000333149 ECHS1P30084 290 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 CIITAP33076 1130 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 APOBEC3HQ6NTF7 200 aaKnown RBP19.61■□□□□ 0.73
TRIM50-201ENST00000333149 SPATS2Q86XZ4 545 aaKnown RBP19.61■□□□□ 0.73
TRIM50-201ENST00000333149 TPCN2Q8NHX9 752 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 ATP6V1G3Q96LB4 118 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 P2RX7Q99572 595 aaKnown RBP19.61■□□□□ 0.73
TRIM50-201ENST00000333149 STXBP5LQ9Y2K9 1186 aa19.61■□□□□ 0.73
TRIM50-201ENST00000333149 MPHOSPH10O00566 681 aaKnown RBP19.6■□□□□ 0.73
TRIM50-201ENST00000333149 AKAP3O75969 853 aa19.6■□□□□ 0.73
TRIM50-201ENST00000333149 GFPT2O94808 682 aa19.6■□□□□ 0.73
TRIM50-201ENST00000333149 FOSP01100 380 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms